Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g00579 ATGGCCGAGTGCCCCGCGAAACGCCCCAAGCGGACTAAAAGAGGACAAGATGATTACTGGCCTGGGAACATTACTGAAATTGAGCTTCATAACTTCATGACCTTCGACAACCTTAAATGCAAGCCCGGTTCACGTCTCAACCTTGTAATCGGACCCAATGGTTCAGGCAAGAGTTCTCTCGTCTGTGCTATAGCCCTTGGTCTCTGCGGCGAGCCTCAGCTTCTAGGGAGAGCGTCGAGTATTGGGGCGTATGTGAAACGCGGAGAGGAGTCTGGTTTTATTAAGATTTCCTTGAGAGGAGAATCTGAGGAGGAACAGATTACCATTACGCGGAAGATAGACACGCACAACAAGTCTGAATGGCTGTTCAATGGCAAAGTGGTGCCAAAAAGAGATGTGGTTGAAAGCATTCGAAGGTTCAACATCCAAGTCAACAATTTGACTCAATTCTTACCACAAGACCGGGTCTGTGAGTTTGCTAAGCTTACTCCTGTACAACTTCTAGAAGAGACCGAAAAGGCTGTTGGCGATCCTCAACTCCCAGTTCAACATCGTGCTCTTGTTGATAAAAGTCGTGAAGTGAAGAGACTTGAAGTTACTGTCAAGCAAAATGGAGATACTTTGAATCAGCTGAAGGCGCTCAATGCGGAACAAGAAAAAGATGTAAAGCGTGTCCGGCAAAGAGAAGAACTTCTGGCAAAGGTTGAATCCATGAAAAAGAAATTGCCATGGCTTAAGTATGACCAGATTAAGGATGATTATATGGATGCAAAAGAGCGGGAGAATGATGCCAAGAGGAAGCTTGATGAAGCTGCTAAGATTATAAATGTTCTCAAAGGACCTATAGAGGAACAAAAGAAGGTGAAAGCAACACAGAAAGCAGCTTGTAAGAAAGTAAGCAATCTCATAGCTGACAATGCCATGAAACGTATGGAGATTCTAGAGAATGAAAGTCGATTGGCGGTGCAAGTAAGGGGAAAATACAATGAAATGGAAGAGTTGAGGAAGCAGGAAGAATCTCGTCAACAAAGAATCTCAAGAGCTAAAGAGGATCTTGCAGCTTCTGAACTAGAACTTGCGAACTTACCCATTTATGAACCTCCTAAGGATGAAATAGAAAGATTAGGTGCTCAAATACTGGAGCTAGAAGTCTCTGCAAAACATAAGAGGATCCAGAAGTCAGAAAAGGATAATATCTTAGGTCAGAAGAAGAGAACCCTGATGCAGTGCCTAGACAGGTTGAAGGATATGGAAAATGCCAATAACAAACTTCTACAGGCGTTGCAAAACTCAGGAGCAGAAAAAATATTTGAGGCTTATCGCTGGTTACAAGAACATCGCAATCAGTTAAACAAAGAGGTGTATGGTCCTGTCCTTCTTGAGGTTAATGTCCCAAACCGAGATCACGCAGCATATTTGGAAGATCACGTCCCTTATTATATCTGGAAGTCTTTCATAACTCAAGATGCTGCTGATCGGGACTTCTTGGTCAAAAGCCTGAGGTCATTTGATGTTCCAGTTTTAAATTATGTAGGAGATAAGGGCAGCAATAAAATGCCATTTGAAGTTTCTGAGGAGATGCAAAAGCTCGGCATCTATTCCAGACTTGACGAAATCTTTGATGCACCTAGTGCTGTCAAGGAGGTTTTGACTAGCCAATTTGGACTAGAACATTCGTATATTGGGTCCAAGGAAACTGATCAAAAAGCTGATGAGGTCCCACGGTTGGGAATTTTAGATCTTTGGACTCCGGAAAATCATTATCGATGGTCTATTTCTAGATATGGAGGCCATGTTTCAGCAAGTGTTGAACCAGTTTCTCCTTCACGTCTTTTTTTGTGTAGTTTGGATGTTGGGGAAGTTGAAAAGCTCAGGTCTAGGAAAAAAGAGCTGGAAGAGACAATTTCTGGTCTGGAGGACAGCTTTAAAACACTTCTGACTGAACAGAGACATTTAGAAGATGAAGCAGCTAAACTTCATAAACAGCGTGAGGAAATTATCAACACAGTACAACTTGAGAAGAGAAAACGACGTGACATGGAAAATCGTGTCAATCAAAGAAAAAAGAAATTAGAGTCTATGGAGAAGGAGGATGACCTGGATACAAATATAAAAAAGCTCACTGATCAAGCTGCCAAATTGAACATGCAGCGATTCCAAATTGCAATTGAAATGAAGACTTTGCTCATCGAGGCTGTTTCATTTAAATGGAGCTTCGCGGAAAAGCACATGGCCTCCATTGAGTTTGACATAAAGATTAAAGAACTGGAAATCAATCTCAAGCAACAAGAAACGGCTGCTATGCAAGCATCTATGCACTTCGAGTACTGTAAGAAAGAGACACAAAATTGCAGAGAACAACTCTCTGTTGCAAAGAGACAGGCAGAATCAATTGCCATACTCACTCCAGAACTTGCAGAGGAATTTCTTGAGATGCCTACTACCATTGAGGAATTGGAAGCTGCAATTCAAGATAATATTTCTCAAGCAAATTCTATTCTTTTTCTAAACCACAACATTCTCGAAGAATACGAAAGCCGTCAGCGTAAGATAGAAGCCATTACTATGAAACTGGAAACAGATGACAAGGAGCTAAAGAAGTGTTTAGCTGAAATAGGCGATTTAAAGGAAAAATGGCTTCCAACATTGAGAAACCTTGTTGCCCAGATAAATGAGACATTTGGTCGTAACTTCCAAGAGATGGCTGTTGCAGGAGAAGTTTCATTGGATGAGCATGACATGGACTTTGATAAATTTGGGATACTTATCAAAGTGAAGTTCAGACAAGCAGGACAGCTTCAAGTGCTGAGTGCTCATCATCAGTCTGGAGGGGAGCGCTCGGTTTCCACCATTCTCTATCTGGTTTCTTTGCAAGACCTTACAAACTGCCCATTCCGTGTGGTCGATGAAATAAATCAAGGAATGGATCCTATAAATGAAAGAAAGATGTTCCAGCAACTAGTGAGAGCAGCCAGCCAACCCAATACACCACAGTGTTTCTTGCTCACACCAAAGTTGCTGCCAGATCTGGAATTCGGTGACATGTGTACCATTCTTAATATAATGAATGGACCTTGGATTGAGAAGCCCTCCAAAGTGTGGAGTGATGGGGATCGTTGGGGAAAGATCATGGGCTTGGTGGGAGAGAATTGA 3153 0.4212 MAECPAKRPKRTKRGQDDYWPGNITEIELHNFMTFDNLKCKPGSRLNLVIGPNGSGKSSLVCAIALGLCGEPQLLGRASSIGAYVKRGEESGFIKISLRGESEEEQITITRKIDTHNKSEWLFNGKVVPKRDVVESIRRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLPVQHRALVDKSREVKRLEVTVKQNGDTLNQLKALNAEQEKDVKRVRQREELLAKVESMKKKLPWLKYDQIKDDYMDAKERENDAKRKLDEAAKIINVLKGPIEEQKKVKATQKAACKKVSNLIADNAMKRMEILENESRLAVQVRGKYNEMEELRKQEESRQQRISRAKEDLAASELELANLPIYEPPKDEIERLGAQILELEVSAKHKRIQKSEKDNILGQKKRTLMQCLDRLKDMENANNKLLQALQNSGAEKIFEAYRWLQEHRNQLNKEVYGPVLLEVNVPNRDHAAYLEDHVPYYIWKSFITQDAADRDFLVKSLRSFDVPVLNYVGDKGSNKMPFEVSEEMQKLGIYSRLDEIFDAPSAVKEVLTSQFGLEHSYIGSKETDQKADEVPRLGILDLWTPENHYRWSISRYGGHVSASVEPVSPSRLFLCSLDVGEVEKLRSRKKELEETISGLEDSFKTLLTEQRHLEDEAAKLHKQREEIINTVQLEKRKRRDMENRVNQRKKKLESMEKEDDLDTNIKKLTDQAAKLNMQRFQIAIEMKTLLIEAVSFKWSFAEKHMASIEFDIKIKELEINLKQQETAAMQASMHFEYCKKETQNCREQLSVAKRQAESIAILTPELAEEFLEMPTTIEELEAAIQDNISQANSILFLNHNILEEYESRQRKIEAITMKLETDDKELKKCLAEIGDLKEKWLPTLRNLVAQINETFGRNFQEMAVAGEVSLDEHDMDFDKFGILIKVKFRQAGQLQVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQCFLLTPKLLPDLEFGDMCTILNIMNGPWIEKPSKVWSDGDRWGKIMGLVGEN* 1051
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g00579 1050 Gene3D - 847 1008 IPR027417 -
Eupl05g00579 1050 Coils Coil 247 274 - -
Eupl05g00579 1050 Coils Coil 621 717 - -
Eupl05g00579 1050 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 24 995 IPR027417 -
Eupl05g00579 1050 Coils Coil 753 773 - -
Eupl05g00579 1050 Coils Coil 208 228 - -
Eupl05g00579 1050 Gene3D - 23 204 IPR027417 -
Eupl05g00579 1050 FunFam Structural maintenance of chromosomes 5 848 1019 - -
Eupl05g00579 1050 Coils Coil 407 434 - -
Eupl05g00579 1050 Coils Coil 321 351 - -
Eupl05g00579 1050 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 5 8 1047 IPR027131 GO:0000724|GO:0005524|GO:0006281|GO:0016887|GO:0030915
Eupl05g00579 1050 Pfam RecF/RecN/SMC N terminal domain 24 992 IPR003395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g00579 Eupl-Chr5 23593166 23684152 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g00579 1 1043 Structural Maintenance of Chromosomes family AT5G15920 68.840 0.0 1479
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g00579 K22803 - nnu:104589955 1642.86