Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g00574 ATGACGATGGAATGGAGCGATTGGGACACAACGGGTTCGGAGGGCAAGTCCGGAGGAATCGACGCGAGAGAACGACACAAGCTGGCGGAGCGTGAACGTCGGAAATCCATGAGAGAGCTCTTCTTGTCCCTCCACGCTCTCCTCCCCCATGCCAACACTGTACGTAAAGAACAATCCGCAATTCTCGACGAGATCATCAAATATATCCCCTTAGCCTCAGCTCGCCTTCGATCGCTCAAGAACCGAAAGGACACACCCTCGGCTCGATCCAAGGCCTCGCCACCGGTCCAGGTCTCGGATCTTAAGTCGGACTCTTCTAAGTCAAGTGACTGCGATATCCGAGTTGCGCCTGAGCCGTCTTCGTCTGTTGCGATCCGAGTTAGAGGTGACCGAGTCAATGTGTCTTTGACAGATACAAAGGGTACCTCACAGACTCTCTTACTGTCTGCTGTCTTGGATGAGCTTGAAGCTCATCATCTTGAGCTCGTCCGTTCTACTCATTGTCGTGACGGAAGTAAACTACTACATCACTCTGAGAGCAAGATTTGTGATGGATTGGACCGGTCTCCTGCTTTGTTAAAAGAAAGATTACAAGAACTAGCTTGCAAACTACACAAGTTGAGGAAATCTTCTTCGCTTAAGAGATCATTTGACCAGCTAGATTGA 666 0.4985 MTMEWSDWDTTGSEGKSGGIDARERHKLAERERRKSMRELFLSLHALLPHANTVRKEQSAILDEIIKYIPLASARLRSLKNRKDTPSARSKASPPVQVSDLKSDSSKSSDCDIRVAPEPSSSVAIRVRGDRVNVSLTDTKGTSQTLLLSAVLDELEAHHLELVRSTHCRDGSKLLHHSESKICDGLDRSPALLKERLQELACKLHKLRKSSSLKRSFDQLD* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g00574 221 MobiDBLite consensus disorder prediction 1 26 - -
Eupl05g00574 221 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 21 72 IPR011598 GO:0046983
Eupl05g00574 221 Pfam Helix-loop-helix DNA-binding domain 23 69 IPR011598 GO:0046983
Eupl05g00574 221 CDD bHLH_AtbHLH_like 26 69 IPR045239 -
Eupl05g00574 221 MobiDBLite consensus disorder prediction 88 104 - -
Eupl05g00574 221 Gene3D - 19 87 IPR036638 GO:0046983
Eupl05g00574 221 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 22 89 IPR036638 GO:0046983
Eupl05g00574 221 PANTHER BHLH DOMAIN-CONTAINING PROTEIN 14 185 IPR044278 GO:0003700|GO:0006355|GO:0009960
Eupl05g00574 221 MobiDBLite consensus disorder prediction 80 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g00574 Eupl-Chr5 23496412 23497381 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Eupl05g00574 HLH 7.1e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g00574 - - msin:131231178 341.658