Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g00556 ATGGCCTTTTTCAGCTGGTTTTCTCTTTTGCTGATTGGCATTCTGTGGAGATTTCTGCTTGTGGTCGCTCAGCACGATGACCGATCGACAATGCTTGCTATGAGGAGAGAGTTTGTAGTATCTGGATGGGGTGCCAACGATTCTGATTACTGCTCTTGGAATGGCGTACGCTGCAGCTCAAACCGATTGATGGTGGAAAAACTTGATCTATCTCACCAGGATCTCCAAGGTAACGTCACTTTAATCTCTGAGCTCAAAGCTTTGAAGTGGCTAGACCTTTCTTACAATAATTTTCATGGACCAATTCCTCCTGCTTTTGAAAATCTCACTGAACTTGAATTTCTCGATTTATCGGGGAATAAGTTTTATAGCTTGATTCCTCCAGGGTTGGGTAATCTCAGGAACCTTAGATCATTAAACCTCTCCAATAACTTTCTTATGGCCGGAATACCCGATGAATTACGTAGTCTTGAAAGATTACAGAATCTCCAAATTTCAGGGAATAAGTTGAATGGTTCTATCCCTTCCTGGGTAGGAAATTTAACCAATCTGAGAGTTTTCACGGCCTATGAGAATGAATTAGGGGGTAGAATTCCCGACAATCTAGGCTCCTTCTCTGAACTTCAGATTTTGAATCTTCACTCAAACCAGCTTGAAGGACCCATACCCATGAGCATTTTTGCTTCAGGGAAGCTTGAAGTTTTGGTCCTGACCTTGAACAACTTGAATGGGAGTCTTCCCAAATCAGTAGGGAACTGCAAAGGCCTTTCGAATCTTCGAATTGGGTACAACAAGCTCATAGGAAACATTCCTAAAGACATTGGCAATGTCAGTAGCCTTACTTACTTTGAAGCAGATAACAATAACCTCTCAGGCGAGATTGTTAGGGAGTTCGCTCAATGCTCCAACCTCACCCTCCTGAATTTAGCCTCAAATGGGTTTACTGGGACTATTCCTCCGGAGCTCGGAGAGCTTACGAACCTGCAGGAGTTGATTTTATCTAGTAATAGTCTCTATGGAGACATCCCAAAATCCCTTCTTAGGGGCAAGAACCTTAGCAAGCTTGATCTAAGCAATAACAGATTCAATGGCACCATACCCGAAGACCTCTGCAACACTCCGAGATTGCAATTCATTCTTTTGGGTCAGAATTCGATAAGGGGAGAGATACCTCATGAGATTGGGAACTGTGTAAAACTACTCGAATTGCAAATGGGTAGTAACTATCTGAGTGGTAGTATCCCTCCTGAGATTGGTCGGATCAAGAATTTGCAGATAGCTCTAAATCTGAGTTTCAATCATCTTCATGGACAGCTACCCGTCGAGTTGGGGAAACTTGACAAGCTGGTTTCATTGGACGTCTCTAACAATCAGCTCTCTGGGAATATCCCATCTGCGCTCAGGGGCATGATGAGCTTGATAGAGGTTAATTTCTCCAGTAATCTGCTCACAGGCCCAATACCCACCTTTCCACCTTTCCAGAAGAGTCCAAATTTAAGTTTTTCAGGGAATAAGGGGCTCTGTGGAGAGCCATTGAGCATCTCCTGTGGGAGTTCTTTCGGATCCAACCACGACTCTTACCATCACAAGGTTTCATACAAGATCATATTAGCTGTCATTGGATCTGGTTTGACAGTTTTTGTTTCAGTAACAATTGTTGTTCTGCTGTTTATGATGAGGGAGAAGCAAGAAAAAGCTGCCGCTGCAGGAGTTACTGAAGATGGAAATGCTGACCCACCACCGATAATAGCAGGCAACGTCTTTGTCGAGAATCTCAGACAAGCAATAGATTTTGATGCCGTGGTCAAAGCAACTCTGAAGGATTCAAATAAGCTCTTTAATGGGACTTTCAGCACTATTTACAAGGCAGTTATGCCTTCCGGGCTGATTCTATCGGTGAAGAGATTGAAATCCATGGACAGAACAGTAATACATCACCAGAACAAGATGATTAGAGAGCTCGAAAGGTTGGGTAAGCTCTGCCATGATCATCTGATGAGACCCATCGGGTTCGTGATATATGAAGATGTTGCTCTCTTGCTGCACCATTACTTACCAAATGGAACCTTAGCTCAGCTTCTTCATGACTCAGCTACTCAAGCCGAATTTGAACCTGATTGGCCAACAAGGCTCTCAATTGCAATTGGAGTGGCAGAAGGTTTGTCTTTCCTTCATCATGTGGCCATCATACATCTGGATATCTCCTCAAGTAACATACACTTGGATGCCAATTTCAAGCCTTTAGTTGGGGAGATTGAGATATCGAAGCTCTTAGATCCGTCGAAGGGCACAGCAAGTATCAGTGCAGTTGCAGGCTCATTCGGTTATATTCCCCCAGAATATGCATACACAATGCAAGTTACAGCACCAGGAAATGTTTATAGCTATGGGGTTGTGTTGCTCGAGATTCTTACAACTAGATTACCAGTTGATGAGGCCTTTGGTGAAGGGATAGATCTGGTGAAATGGGTTCATAGTGCACCAGCAAGAGGAGAAACCCCAGAGCAAATACTGGACGCGAGGCTGAGCACGGTTTCTTTTGCTTGGAGGAAACAAATGCTTGCAGTTTTAAAGGTTGCCTTGCTCTGCACCGACATGACTCCAGCCAAACGGCCTAAAATGAAGAAGGTGGTAGAGATGCTCCAAGAAACAAATCAAAGCTGA 2664 0.4381 MAFFSWFSLLLIGILWRFLLVVAQHDDRSTMLAMRREFVVSGWGANDSDYCSWNGVRCSSNRLMVEKLDLSHQDLQGNVTLISELKALKWLDLSYNNFHGPIPPAFENLTELEFLDLSGNKFYSLIPPGLGNLRNLRSLNLSNNFLMAGIPDELRSLERLQNLQISGNKLNGSIPSWVGNLTNLRVFTAYENELGGRIPDNLGSFSELQILNLHSNQLEGPIPMSIFASGKLEVLVLTLNNLNGSLPKSVGNCKGLSNLRIGYNKLIGNIPKDIGNVSSLTYFEADNNNLSGEIVREFAQCSNLTLLNLASNGFTGTIPPELGELTNLQELILSSNSLYGDIPKSLLRGKNLSKLDLSNNRFNGTIPEDLCNTPRLQFILLGQNSIRGEIPHEIGNCVKLLELQMGSNYLSGSIPPEIGRIKNLQIALNLSFNHLHGQLPVELGKLDKLVSLDVSNNQLSGNIPSALRGMMSLIEVNFSSNLLTGPIPTFPPFQKSPNLSFSGNKGLCGEPLSISCGSSFGSNHDSYHHKVSYKIILAVIGSGLTVFVSVTIVVLLFMMREKQEKAAAAGVTEDGNADPPPIIAGNVFVENLRQAIDFDAVVKATLKDSNKLFNGTFSTIYKAVMPSGLILSVKRLKSMDRTVIHHQNKMIRELERLGKLCHDHLMRPIGFVIYEDVALLLHHYLPNGTLAQLLHDSATQAEFEPDWPTRLSIAIGVAEGLSFLHHVAIIHLDISSSNIHLDANFKPLVGEIEISKLLDPSKGTASISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRLPVDEAFGEGIDLVKWVHSAPARGETPEQILDARLSTVSFAWRKQMLAVLKVALLCTDMTPAKRPKMKKVVEMLQETNQS* 888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g00556 887 FunFam Nuclear pore complex protein NUP107 28 176 - -
Eupl05g00556 887 SUPERFAMILY Protein kinase-like (PK-like) 606 883 IPR011009 -
Eupl05g00556 887 SUPERFAMILY L domain-like 259 513 - -
Eupl05g00556 887 Gene3D Transferase(Phosphotransferase) domain 1 685 887 - -
Eupl05g00556 887 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 22 883 - -
Eupl05g00556 887 Pfam Leucine rich repeat N-terminal domain 26 59 IPR013210 -
Eupl05g00556 887 Pfam Leucine rich repeat 326 386 IPR001611 GO:0005515
Eupl05g00556 887 Pfam Leucine rich repeat 67 122 IPR001611 GO:0005515
Eupl05g00556 887 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 685 887 - -
Eupl05g00556 887 SUPERFAMILY L domain-like 46 343 - -
Eupl05g00556 887 Gene3D Ribonuclease Inhibitor 24 167 IPR032675 -
Eupl05g00556 887 Pfam Protein kinase domain 609 878 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl05g00556 887 SMART LRR_typ_2 85 108 IPR003591 -
Eupl05g00556 887 SMART LRR_typ_2 109 132 IPR003591 -
Eupl05g00556 887 SMART LRR_typ_2 157 181 IPR003591 -
Eupl05g00556 887 SMART LRR_typ_2 325 349 IPR003591 -
Eupl05g00556 887 SMART LRR_typ_2 205 229 IPR003591 -
Eupl05g00556 887 SMART LRR_typ_2 446 469 IPR003591 -
Eupl05g00556 887 SMART LRR_typ_2 133 156 IPR003591 -
Eupl05g00556 887 SMART LRR_typ_2 350 373 IPR003591 -
Eupl05g00556 887 Gene3D Ribonuclease Inhibitor 228 519 IPR032675 -
Eupl05g00556 887 Gene3D Ribonuclease Inhibitor 168 227 IPR032675 -
Eupl05g00556 887 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 225 520 - -
Eupl05g00556 887 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 576 684 - -
Eupl05g00556 887 ProSiteProfiles Protein kinase domain profile. 606 887 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl05g00556 887 Gene3D Phosphorylase Kinase; domain 1 583 684 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g00556 Eupl-Chr5 22775244 22779535 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g00556 1 886 Receptor kinase-like Gene Family AT2G41820 71.622 0.0 1284
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Eupl05g00556 Pkinase 1.2e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g00556 - - nnu:104597379 1437.55