Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g00553 ATGAAGAGGTTGAGATCGTACGGTGATGATCTTGATTCGGTTGGGGAGAAGGGGGTTTGTAAAGATTGGGGAAGAAGGGATCAAGATCCTGAGCGTTCGTCTTCGCATCGGAGATTTCATTCGAAAGCTGATAACGGACGGAAAGGATTATCGTCTTCGTCTTCTTACGATCGATCGGTAGATGATGATCGCGAGGCCTCCAGATCGTTGCGGAAGCGATTGGATCATGATTCTGATGGATTCGATCGGAGGAAGAGCTTTGATAGGTACAGAGACTGCAGTGATAGGGGGATTTCGATTTCTTCGCCTCGGAATGCATATGGCAGCGAGCGTATTCATCGATCTGATAGCTTTTCTGGGTCTAGGCGGGAATTCCCAAAGGGATTTAGGTCGGAGAGAGATCGGTCCCGGCGGGAGGAGAGTGTTTCATCGTGGCGGAGATTGAGCGGAAGCAAAGATGTTGACGAAGATCCAAGGCTGGGTGGCAGTTCAGCTAGAGGGAGTCGAGTTGCGTCTGAGGATAGAGTAAATGTGAAATCTCCGCAGGGTTCAAGAGATGTGGTTAAGTCGCCTCCGTGGTCCAAAGACTCCAGTGGCGAGCAGTCCAAGAGTGTTGAGGTGAAGAAGAATGATGAAGTTCAAGGAGAGAGTGGTAGTGGCAGTGAAATGGAAGAAGGGGAGCTTGAACCTGAACCTGAACCTGAACCTGAACCTGAACCTGACCCTGAACCCCGACTTCCAGTTGTGGCGAACTCTGAGAATAAGGAGTTTGAGTCGGAGAACCAGATCGAATCAGAGACGAATTTGGAGAATGAATCAAAATCATTCTCCGAAGAGAAATTAAAACTCAATACAGAAGGTGTTTCTGATGGAAAGCAGGAAGGTATAACGTTGGAGACAGTTACAGATGTAGTGAAGGAAATCGATGAGTTGCCAGATTGTCAGAACACCTCCATCAAAGGATTGGGTGGGGGTGAAGAAGCAGCAGCTGTGGGTTATGGAAGTGGAGAGAATGAAGAAAGTTCCAGGGCAAATAGCGAGTGCTTACCCTCCTCTGACCATAAACCCGAGGGGCAGGGTAAAGAAGAAGCAATGGGGGGTGTGAGTGCGGAGAACTCTTTGCCTTTGGAGGAGGGACAGAAAGAGGAAAAAGGTATAGATCTTGAAGTCGAGGCTGAGGACATCGATTTGGTGAATTCAACTAAGGAAGCTGGAGAAGAATCCGACATGCCTGATGCAACTCTGACCCTCATAACTGATAAGTTATCTCAAAATGGCAAGGACAAAGGTAAAAGTCTGGCAATTTTTCCCTCTAGTGAAGCCAATTCCATGGAAGATGGTCGATGGATGGAAAGAGATTTGCTGGCCTGTAGAGATGATGCTATGGAAGGACCGAGCAGTCGGGGTTTTGAGTTGTTCTTTAGCCCTGTAGTTACAAGGACAGAGAAGACAAATCTTTCTGGTGTTCATAAGCATAAAGATGAAAAGCTGAAAATGGAGCCGCTTGAGCTTTCTCTGGGTTTGCCAAATGTTTCATTACCTCTTGCTTCCCACGATCCAAACCCAACTCCTAGTTCACCTAATCTCGCAAGGAGTGTTCAGTCTTTACCTAACACCTTTCGTACGAGCTCTGATGGGTTTACTGCATCAATTTCTTTTTCTGGTTCTCAGACATTCATGCACAACCCCAGCTGCTCTCTCACGCAGAACTCATTTGAGAACTACGAACAATCAGTTGGTAGTCATCCTATATTTCAGGGAGTTGATCAAGTTTCTCATGGTGCTTGGCCAGGACAGTCTTCAAATGAGCCTAAGCGCAAGGAAGTCCCACTGTATCAGAGAATACTACTGAATGGAAATGGGTCCCTTCATGCATCTCAAACGTCACAAGGTATTTTAAATTCGCAAGCCATGCAAGGACAACATCTTAAAGTTTCTGAAGGAAGCACTGGGGTAAGTGTTGGCCTGGATCGGCAGTCAAGTCTTCCAAGACAGCTTTCAGGAGTACAGTCGAGGCACCGTGATGAAGTCAGATCCCCTACAAACAGTATCGGATCTCGTGAAACCAAATCAGAATATAGTAAGGATAAGAAGCGGCTAATGAGAGAGAGAGGTGGTGGTAATCTATTTAGGAGCAGTAGTCATAGGGAGATGGAGCAGCTTGTGATAGGTGGAACTGGTTTTGTTGAGAGAATCATCACCATGATAGTTTCAGAACCAATACAAATAATGGCCAGGAGAATTCAAGAAATGACAGAACAGTCTATAGCATTTCTAAAGGAGAGTGCTTATGAGATGATAGCGAATGACGATAAGCGTGCACAATTACACGTGTTTCAGGAAGCACTGCAGAACAGGTCTGACCTTACGTTAGAGACGCTATCAAAGTCCCATCAGGCTCAGTTGGAGATCTTGGTGGCTCTTAAAACTGGTATCCAAGATTTTCTTCGGAGGGACAATAAGATTCCTTCTTCTGATTTAGCTGAGATCTTTCTGAACTTGAGGTGCAGAAATCCCAATTGTCGGTGGCCTGTGGATGAATGTGATTGCAAGGTTTGTGTGCAGAAGAATGACTTCTGCAGTGCTTGTATGTGTCTTGTTTGCTCAAAATTTGACATGGCAAATAATACTTGTAGTTGGGTTGGCTGTGATGTCTGCATTCATTGGTGCCATACGGATTGTGGACTACAGGAATCTTTGATTAGAAATGGGCGGAGTGTCACTGGGACTCAAGGGACGACTGAGATGCAATTCCATTGTGTTGCTTGTGATCAACCATCTGAGATGTTTGGCTTTGTGAAAGATGTTTTCAAAACTTGTGCGAAGGAATGGAAAACTGAAACTCTTTCCAAGGAACTTGAGTATGTGAAGAGGATCTTTTTTGCCAGCAATGATGTGAGGGGGAAACAACTGCATGATCTTGCTGATCAGATGCTGGCAAGATTGGAAAATAAGTCCAATCTTCCCGAGGTCTATAATCATATCATGGCGTTCCTAACCGAAAGTGAGTCCAAGTTTGGAAACAGTTCAACATTTTCTGTGAAGGAGAAACCCCTTAAGAACTCAGGAGACGTTACCAATGGGGTTGTTGGTCGGAGCCATGAACCCATGTGGCTGCCATCTGTTTCTACCGAAAAGGCTCTTCGCAAGGAAAATGGCAGTAGTTCTCTTCCCGCCTTGGATTGGGATCAGGGTAGACGTCCTGAGGATCCAGAGTTGCGGATGAATGCTGAAAAGAAGCCTGTCACAGATGAGTTGGAGAGCATTGTGAGGATCAAACAGGCAGAGGCTAAAATGTTCCAAGCACGTGCTGATGATGCAAGAAGAGAAGCAGAAGGCTTGAAACGCATTGCAATAGCTAAGAATGAAAAGATTGAAGAGGAGTACACGAGCCGGATCACAAAGTTACGATTGGTTGAGGCCGAGGAAAGGCGCAGACAAAAGCTTGAAGAACTTCAGGTTCTAGAAAGAGCACACCGTGAATACTTCAGTATGAAGATGAGGATGGAAGCGGACATTAAAGATCTGTTGTTGAAAATGGAAGCTACAAAACGAAATCTCAGTATGTGA 3570 0.4555 MKRLRSYGDDLDSVGEKGVCKDWGRRDQDPERSSSHRRFHSKADNGRKGLSSSSSYDRSVDDDREASRSLRKRLDHDSDGFDRRKSFDRYRDCSDRGISISSPRNAYGSERIHRSDSFSGSRREFPKGFRSERDRSRREESVSSWRRLSGSKDVDEDPRLGGSSARGSRVASEDRVNVKSPQGSRDVVKSPPWSKDSSGEQSKSVEVKKNDEVQGESGSGSEMEEGELEPEPEPEPEPEPDPEPRLPVVANSENKEFESENQIESETNLENESKSFSEEKLKLNTEGVSDGKQEGITLETVTDVVKEIDELPDCQNTSIKGLGGGEEAAAVGYGSGENEESSRANSECLPSSDHKPEGQGKEEAMGGVSAENSLPLEEGQKEEKGIDLEVEAEDIDLVNSTKEAGEESDMPDATLTLITDKLSQNGKDKGKSLAIFPSSEANSMEDGRWMERDLLACRDDAMEGPSSRGFELFFSPVVTRTEKTNLSGVHKHKDEKLKMEPLELSLGLPNVSLPLASHDPNPTPSSPNLARSVQSLPNTFRTSSDGFTASISFSGSQTFMHNPSCSLTQNSFENYEQSVGSHPIFQGVDQVSHGAWPGQSSNEPKRKEVPLYQRILLNGNGSLHASQTSQGILNSQAMQGQHLKVSEGSTGVSVGLDRQSSLPRQLSGVQSRHRDEVRSPTNSIGSRETKSEYSKDKKRLMRERGGGNLFRSSSHREMEQLVIGGTGFVERIITMIVSEPIQIMARRIQEMTEQSIAFLKESAYEMIANDDKRAQLHVFQEALQNRSDLTLETLSKSHQAQLEILVALKTGIQDFLRRDNKIPSSDLAEIFLNLRCRNPNCRWPVDECDCKVCVQKNDFCSACMCLVCSKFDMANNTCSWVGCDVCIHWCHTDCGLQESLIRNGRSVTGTQGTTEMQFHCVACDQPSEMFGFVKDVFKTCAKEWKTETLSKELEYVKRIFFASNDVRGKQLHDLADQMLARLENKSNLPEVYNHIMAFLTESESKFGNSSTFSVKEKPLKNSGDVTNGVVGRSHEPMWLPSVSTEKALRKENGSSSLPALDWDQGRRPEDPELRMNAEKKPVTDELESIVRIKQAEAKMFQARADDARREAEGLKRIAIAKNEKIEEEYTSRITKLRLVEAEERRRQKLEELQVLERAHREYFSMKMRMEADIKDLLLKMEATKRNLSM* 1190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g00553 1189 MobiDBLite consensus disorder prediction 1 298 - -
Eupl05g00553 1189 MobiDBLite consensus disorder prediction 109 162 - -
Eupl05g00553 1189 MobiDBLite consensus disorder prediction 222 238 - -
Eupl05g00553 1189 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 1084 1104 IPR004082 -
Eupl05g00553 1189 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 1123 1145 IPR004082 -
Eupl05g00553 1189 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 801 816 IPR004082 -
Eupl05g00553 1189 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 786 801 IPR004082 -
Eupl05g00553 1189 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 747 769 IPR004082 -
Eupl05g00553 1189 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 871 891 IPR004082 -
Eupl05g00553 1189 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 944 963 IPR004082 -
Eupl05g00553 1189 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 827 848 IPR004082 -
Eupl05g00553 1189 PANTHER VERNALIZATION-INSENSITIVE PROTEIN 3 1 1187 IPR004082 -
Eupl05g00553 1189 MobiDBLite consensus disorder prediction 516 532 - -
Eupl05g00553 1189 MobiDBLite consensus disorder prediction 689 705 - -
Eupl05g00553 1189 Pfam Coiled-coil region of Oberon 1067 1177 IPR032535 -
Eupl05g00553 1189 Coils Coil 1166 1186 - -
Eupl05g00553 1189 MobiDBLite consensus disorder prediction 201 215 - -
Eupl05g00553 1189 Pfam PHD - plant homeodomain finger protein 836 957 IPR032881 -
Eupl05g00553 1189 MobiDBLite consensus disorder prediction 57 95 - -
Eupl05g00553 1189 Coils Coil 1138 1158 - -
Eupl05g00553 1189 Coils Coil 1090 1128 - -
Eupl05g00553 1189 MobiDBLite consensus disorder prediction 642 668 - -
Eupl05g00553 1189 CDD PHD_OBE1_like 864 923 IPR047578 -
Eupl05g00553 1189 MobiDBLite consensus disorder prediction 642 710 - -
Eupl05g00553 1189 MobiDBLite consensus disorder prediction 271 287 - -
Eupl05g00553 1189 MobiDBLite consensus disorder prediction 513 532 - -
Eupl05g00553 1189 MobiDBLite consensus disorder prediction 1046 1072 - -
Eupl05g00553 1189 MobiDBLite consensus disorder prediction 314 394 - -
Eupl05g00553 1189 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g00553 Eupl-Chr5 22720146 22728045 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g00553 836 983 PHD Gene Family AT5G57380 26.351 1.72e-09 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g00553 - - nnu:104585890 1587.39