Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g00511 ATGATGATCCTCATAGAACAATTCCAATCGGATGATGAGGAGAAAGAGTGGTACTTCACTCCTAGGGATCGCAAATATCCAAATGGATCTTGCCCGAAACGTTCGGCCGATGACAGCTATTGGAAAGCATCAGGATCCGAAGATCATATCATGGACAACGTCACCTACATAAAAATTGGGGCACTGATCTTCTATATAGGGAAGGCTACCAATGGGACGAAAACCAACTGGGTAATGCATGAGTATACACTTCATGGTGACTGCCCTCGAGTACGACTGATCGTCAATGCTATGAGGGTCTCAGACCTTGCATCTGATGGCACAATAAGTACTGATTCGATGGAGCAGATGATCAGCACTGATGATTATCCGATTGATCTGATGAGCATGTGCACTGATAATCGTATGGAAACCAGCAGATGA 423 0.4468 MMILIEQFQSDDEEKEWYFTPRDRKYPNGSCPKRSADDSYWKASGSEDHIMDNVTYIKIGALIFYIGKATNGTKTNWVMHEYTLHGDCPRVRLIVNAMRVSDLASDGTISTDSMEQMISTDDYPIDLMSMCTDNRMETSR* 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g00511 140 Pfam No apical meristem (NAM) protein 10 84 IPR003441 GO:0003677|GO:0006355
Eupl05g00511 140 Gene3D NAC domain 3 117 IPR036093 GO:0003677|GO:0006355
Eupl05g00511 140 ProSiteProfiles NAC domain profile. 1 101 IPR003441 GO:0003677|GO:0006355
Eupl05g00511 140 SUPERFAMILY NAC domain 12 89 IPR036093 GO:0003677|GO:0006355
Eupl05g00511 140 PANTHER NAC TRANSCRIPTION FACTOR 56 13 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g00511 Eupl-Chr5 21632624 21633398 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g00511 14 102 NAC Transcription Factor Family AT1G01720 54.945 1.25e-24 94.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Eupl05g00511 NAM 5.9e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g00511 - - hbr:110635553 99.3673