Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g00487 ATGGAAAATTACAGAAAACCTCCATTGAAGCCATGGAAGAAAGGCCCCACCAGAGGCAAAGGTGGCCCTCAGAATGCGACGTGCGAGTACCGGGGAGTTAGACAAAGAACTTGGGGCAAATGGGTTGCAGAAATCAGAGAGCCCAAGAAGAGAACTAGACTTTGGTTGGGTTCTTTCGCCACTGCTGAAGAAGCCGCCATGGCCTACGATGAAGCTGCGAGGAGGTTGTATGGGCCGGAAGCTTATCTCAATCTACCACACCTTCAGTCAAACTTCAATCCTTCTAACAAATCTCAAAAGTTCAAATGGTTTCCTTCCAAGAACTTCATTTCAATGTTTCCTTCATGTGGGTTGCTTAATATAAATGCCCAACACAATGTTCATGTCATTCATCAAAGGATCCAAGAGCTTAAAAAAAATGACACCATCAACCAATTTTCTTCATCATCTTCATCGTCTCATGATTCGAGACCTGAATTTCGAATCACAGATGAGAAAACCCACTTAGAAAATTCTTTAATTGAAGAAGAGTTGGAGTTTTCATCCAAAAAGCTGTTAGGGGAGCATGAAGAGAAGCCTCAGATTGATCTAAAGGAATTTCTTCAGCAGTTGGGTATACTGAAAGAAGAGTGTGCATCGGATGGCAACGACACAACCGGAAGCTTTCCATTTCCGGAATCATTGCCAGAGGACGACGGGTTAGCAGCTTCTAGTGAGCATGCTTTCAATTGGGACACACTGGTGGAAATGAATGCACTAGAATATCATCAGAGAGCAGACACCACTAGTTTGCAGGTTGATGACATACATGAAGATTTGAGCTTCCCTTCTTCTATTTGGGATTTCTGA 849 0.4323 MENYRKPPLKPWKKGPTRGKGGPQNATCEYRGVRQRTWGKWVAEIREPKKRTRLWLGSFATAEEAAMAYDEAARRLYGPEAYLNLPHLQSNFNPSNKSQKFKWFPSKNFISMFPSCGLLNINAQHNVHVIHQRIQELKKNDTINQFSSSSSSSHDSRPEFRITDEKTHLENSLIEEELEFSSKKLLGEHEEKPQIDLKEFLQQLGILKEECASDGNDTTGSFPFPESLPEDDGLAASSEHAFNWDTLVEMNALEYHQRADTTSLQVDDIHEDLSFPSSIWDF* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g00487 282 Pfam AP2 domain 28 78 IPR001471 GO:0003700|GO:0006355
Eupl05g00487 282 FunFam Ethylene-responsive transcription factor 2 28 87 - -
Eupl05g00487 282 SMART rav1_2 29 92 IPR001471 GO:0003700|GO:0006355
Eupl05g00487 282 PRINTS Ethylene responsive element binding protein signature 30 41 IPR001471 GO:0003700|GO:0006355
Eupl05g00487 282 PRINTS Ethylene responsive element binding protein signature 52 68 IPR001471 GO:0003700|GO:0006355
Eupl05g00487 282 ProSiteProfiles AP2/ERF domain profile. 29 86 IPR001471 GO:0003700|GO:0006355
Eupl05g00487 282 Gene3D AP2/ERF domain 29 87 IPR036955 GO:0003700|GO:0006355
Eupl05g00487 282 MobiDBLite consensus disorder prediction 1 29 - -
Eupl05g00487 282 CDD AP2 28 88 IPR001471 GO:0003700|GO:0006355
Eupl05g00487 282 SUPERFAMILY DNA-binding domain 29 87 IPR016177 GO:0003677
Eupl05g00487 282 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 5 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g00487 Eupl-Chr5 20757549 20758764 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g00487 9 282 AP2-EREBP Transcription Factor Family AT3G57600 57.244 4.40e-95 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Eupl05g00487 AP2 1.9e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g00487 - - nnu:104603435 397.127