Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g00481 ATGGCCGAAACGCCCAAAAAACCATTACAATCCCCTACGAAACCGAAGCGATCATCTCCTTTGAACCCAAAACCCTCTCCTTCTTCCGTCCTTTCGTTCCCTCCAACGCCGGGAACCCCATCTTTTCGTCGATCTTCACGGCTGATTTCTACAATCTCCAGTCCCGAAACCCCTGGCATATCATTTGATCAGGTCGAAGAAATCATCAACGATGGTGTAAAAACTCCAAAATCTGCCAAAAACGGCGGAAGATCGAGAGGGAGAGTGGAGAAAGCTTCAGTCGAGGCTTTGTTCTCTCCAGTACCTCCCGATCTTCCCGAGCCGAAGAAAAGGAAGAGGAAAAGGTCTGAAAAGGAGAAGACGCTTAAAACGAGAGCTAGGGTTTCTAGAAATGTTAGATTTGAGAAGAAAACAAAGAAGAAGAGCGATGGGCCGAAGAAGCGTGTTTATTACAAGAAGGTCGTCTACGATGGTGGAGAATTTGGAGTCGGAGACGATGTTTATGTGAGGAGGAGAGATGACGCAAGCTCTGATGGTGAAGATCCTGAGGTGGAAGAATGTCAGGTCTGCTTCAAGTCTGGAACGGCTCTGATGATCGAATGTGACGATTGCTTGGGTGGGTTTCATCTCAAATGCCTTAAACCTCGGTTGAAGGAGGTTCCGGAAGGGGTTTGGATTTGTAAATTTTGCGAGGCTCGGAAAGCGGGGAAGAATGTTGTGCTGCCCACGCCACCGAAGGGGAAGAAGCGGATGAGACCGGCGAGGGAGAAGCTTCTTTCCAGTGATCTATGGGCTGCCCATATTGAAAGTTTATGGAAAGAACCAGATGGTAGCTATTGGTTTAGGGGTCGTTGGTATATAATTCCCGAAGAGACTGCAGCCGGAAGGCAGCCACATAACCTACGCAGGGAGCTTTATCGCACAAACGATTTCGCCGACATTGAGATGGAATCTGTCCTTAGGCATTGTTATGTTATGAATCCTAAAGAATTTTCTAAAGCCAACAACGAGGGGGATGATGTCTTCCTCTGTGAGTACGAATATGATGTCCATTGGCACAGTTTCAAGCGTCTCGCAGAGATCGATAATGGTGAAGAGGATGATGAAGAAGATGGCAGTGATGAAGATTGGGATTCTTGTAAGGATTCAGGTTCTGATACAGAAGTAGACTTGGAATATGAAGAGAAGAATCTGAAGGTTTTATTAACTGGGCAATCCCCCGCTCACGAATTGGCTGCAAACTCAAGGAAGGGGCGAATATTTGGTCTTCAAAAAATAGGGACAAAGAAAATCCCAGAGCATGTGAGATGCCACAAGCAAACTGAACTTGAAAGAGCAAAAGCAACATTGTTGTTAGCAACTTTACCTAAATCTCCACCTTGCAGGAATAAAGAAATGGAAGAGATAATTTCATTTGTCAAAGGTGCTATCTGTGACGATCAATGTCTAGGGCGCTGCCTGTACATCCATGGTGTTCCTGGAACTGGCAAGACTATGAGTGTGCTTGCAGTGATGAGGAATCTAAGGTCTGAAGTTGATGCAGGAAGTATAAAACCCTACTGTTTTGTTGAGATTAATGGTCTAAAATTGGCTTCCCCGGAGAACATCTACAGGGTTATATATGAAGCACTAACTGGACACAGGGTTAGTTGGAAAAAGGCTCTCCACCTTCTGAATGAGCGGTTTTCAGACAGTACAAAAGTCGAAAAAGAAGAGAATCAGCCCTGTGTTCTACTCATCGATGAGCTTGATCTTCTTGTAACCAGGAACCAGTCGGTTCTATACAATATTCTTGATTGGCCCACTAAGCCACATTCCAAATTGGTTGTAATAGGCATAGCAAATACCATGGATCTTCCGGAGAAGTTACTTCCCCGTATTTCAAGTCGTATGGGGATTCAAAGGCTTTGTTTTGGCCCCTATAATTACCTACAACTGCAAGAAATCATTTCAAGTCGTCTAAAAGGCATTGATGCATTTGAAAAACAAGCTATAGAATTTGCTTCAAGAAAGGTAGCAGCCATTTCAGGAGATGCCCGTCGTTCCCTGGAAATATGTAGGCGTGCAGCAGAACTTGCCGATTATCGACTTAAGAAATCATCCTCCATTCCAGATTCTGCATCCACAGGAAAATCCCTTGTTGGCATGGCTGAGGTGGAAGCAGCCATACAAGAAATGTTTCAGGCACCCCATATTCAAGTAATGAAAAGTAGTTCGAAACTTAGTAAAATCTTTCTGGTGGCTATGGTGCATGAACTCTACAAAACTGGAATGGGTGAAACCACCTTTGAAAAGTTGGCAATGACTGTTTCCTGTCTCTGTTCAAGCAATGGGGGAGTGTTTCCTGGATGGGATACACTCTTAAAAGTTGGCTGTAAGCTTGGTGAATCCAGAATCATTCTATGTGAAGCAGGGGCTAGGCATAGGTTGCAAAAATTACAGCTCAATTTTCCAAGTGATGACATAACATTTGCGCTGAAGGACTGCCCGGAGCTACCTTGGTTGGCTAAGTACCTGTGA 2520 0.4464 MAETPKKPLQSPTKPKRSSPLNPKPSPSSVLSFPPTPGTPSFRRSSRLISTISSPETPGISFDQVEEIINDGVKTPKSAKNGGRSRGRVEKASVEALFSPVPPDLPEPKKRKRKRSEKEKTLKTRARVSRNVRFEKKTKKKSDGPKKRVYYKKVVYDGGEFGVGDDVYVRRRDDASSDGEDPEVEECQVCFKSGTALMIECDDCLGGFHLKCLKPRLKEVPEGVWICKFCEARKAGKNVVLPTPPKGKKRMRPAREKLLSSDLWAAHIESLWKEPDGSYWFRGRWYIIPEETAAGRQPHNLRRELYRTNDFADIEMESVLRHCYVMNPKEFSKANNEGDDVFLCEYEYDVHWHSFKRLAEIDNGEEDDEEDGSDEDWDSCKDSGSDTEVDLEYEEKNLKVLLTGQSPAHELAANSRKGRIFGLQKIGTKKIPEHVRCHKQTELERAKATLLLATLPKSPPCRNKEMEEIISFVKGAICDDQCLGRCLYIHGVPGTGKTMSVLAVMRNLRSEVDAGSIKPYCFVEINGLKLASPENIYRVIYEALTGHRVSWKKALHLLNERFSDSTKVEKEENQPCVLLIDELDLLVTRNQSVLYNILDWPTKPHSKLVVIGIANTMDLPEKLLPRISSRMGIQRLCFGPYNYLQLQEIISSRLKGIDAFEKQAIEFASRKVAAISGDARRSLEICRRAAELADYRLKKSSSIPDSASTGKSLVGMAEVEAAIQEMFQAPHIQVMKSSSKLSKIFLVAMVHELYKTGMGETTFEKLAMTVSCLCSSNGGVFPGWDTLLKVGCKLGESRIILCEAGARHRLQKLQLNFPSDDITFALKDCPELPWLAKYL* 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g00481 839 Pfam AAA lid domain 661 694 IPR041083 -
Eupl05g00481 839 Gene3D - 439 636 IPR027417 -
Eupl05g00481 839 MobiDBLite consensus disorder prediction 363 377 - -
Eupl05g00481 839 MobiDBLite consensus disorder prediction 35 60 - -
Eupl05g00481 839 ProSiteProfiles BAH domain profile. 231 359 IPR001025 GO:0003682
Eupl05g00481 839 MobiDBLite consensus disorder prediction 18 34 - -
Eupl05g00481 839 FunFam Origin recognition complex subunit 1 440 639 - -
Eupl05g00481 839 MobiDBLite consensus disorder prediction 363 388 - -
Eupl05g00481 839 Gene3D - 125 382 IPR043151 -
Eupl05g00481 839 CDD BAH_plant_2 207 359 - -
Eupl05g00481 839 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 453 696 IPR027417 -
Eupl05g00481 839 PANTHER CELL DIVISION CONTROL PROTEIN 6-RELATED 291 835 - -
Eupl05g00481 839 Pfam ATPase family associated with various cellular activities (AAA) 488 633 IPR003959 GO:0005524|GO:0016887
Eupl05g00481 839 FunFam Origin recognition complex subunit 1 182 249 - -
Eupl05g00481 839 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 179 242 IPR013083 -
Eupl05g00481 839 SMART PHD_3 186 231 IPR001965 -
Eupl05g00481 839 SMART AAA_5 483 637 IPR003593 GO:0016887
Eupl05g00481 839 MobiDBLite consensus disorder prediction 1 125 - -
Eupl05g00481 839 Gene3D - 637 728 - -
Eupl05g00481 839 SMART BAH_4 159 359 IPR001025 GO:0003682
Eupl05g00481 839 ProSiteProfiles Zinc finger PHD-type profile. 184 233 IPR019787 -
Eupl05g00481 839 CDD AAA 464 640 - -
Eupl05g00481 839 Pfam PHD-finger 187 232 IPR019787 -
Eupl05g00481 839 SUPERFAMILY FYVE/PHD zinc finger 174 237 IPR011011 -
Eupl05g00481 839 Pfam BAH domain 267 356 IPR001025 GO:0003682
Eupl05g00481 839 FunFam Origin recognition complex subunit 1 636 728 - -
Eupl05g00481 839 ProSitePatterns Zinc finger PHD-type signature. 187 230 IPR019786 -
Eupl05g00481 839 FunFam Origin recognition complex subunit 1 250 442 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g00481 2 839 Core DNA Replication Machinery Family AT4G14700 63.647 0.0 1029
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Eupl05g00481 AAA 2.1e-20 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g00481 K02603 - nnu:104590289 1280