Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g00465 ATGAACCGACAGGTGGAGCTTCATTACATAAATACTGGATTTCCGTACACTATTACCGAAAGTTTTATGAATTTGTTTGAAGGCCTTACATACAGTCAGGCAGATTTTTCTTTTGCGGGATCAATGCATGATCAGGAGAGTGCATATTGGTCTATGCATGCGGGTTCAAACAAATTTGGATTATCTGGTCCAGGAAGTATGTCATATTATGGCTATGGTCATCCTTATGAGGTAAATGATCTTGTACCGCGGATGGATGGGGGGAGGAGGATTTGGGAGAACTCTTCAATGACGAATAACGAAGAGCCAGCACCCCTAGTTATGCATGCGGGAGGTAGTTCCAGCACAAATCTGCATGCCAGCTCTGAAGAATGCATTCGGAGTCATCATAATGCTAGTAGTTCACAGGTCTTTTGGCAGGACAATATTGACCCAGACAATATGACTTACGAGGAATTACTTGATTTAGGTGAGACAGTTGGAACTCACAGCCGGGGCCTTTCCCAAGAACTTATTTCATCACTTCCAATCTCAAAGTACAAATGTGGTGGCTTCTTTTCAAGAAAGAAGTCTCGAGGCGAACGGTGTGTGATTTGCCAGATGGAATATAAAAAAGGAGAGCGTCTGATTACTCTGCCATGCCAACATATCTACCATGCCGGCTGTTGCACCAGATGGCTTAGCATCAACAAGGCATGCCCAGTTTGCTACACTGAGGTATTTGGTGAAGACTCCAAGCATTAA 744 0.4382 MNRQVELHYINTGFPYTITESFMNLFEGLTYSQADFSFAGSMHDQESAYWSMHAGSNKFGLSGPGSMSYYGYGHPYEVNDLVPRMDGGRRIWENSSMTNNEEPAPLVMHAGGSSSTNLHASSEECIRSHHNASSSQVFWQDNIDPDNMTYEELLDLGETVGTHSRGLSQELISSLPISKYKCGGFFSRKKSRGERCVICQMEYKKGERLITLPCQHIYHAGCCTRWLSINKACPVCYTEVFGEDSKH* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g00465 247 ProSiteProfiles Zinc finger RING-type profile. 196 236 IPR001841 -
Eupl05g00465 247 FunFam E3 ubiquitin ligase BIG BROTHER 157 241 - -
Eupl05g00465 247 SUPERFAMILY RING/U-box 195 241 - -
Eupl05g00465 247 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 157 241 IPR013083 -
Eupl05g00465 247 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 243 IPR033276 GO:0004842|GO:0016567|GO:0046621
Eupl05g00465 247 Pfam Ring finger domain 195 236 IPR001841 -
Eupl05g00465 247 SMART ring_2 196 236 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g00465 Eupl-Chr5 19958537 19970337 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g00465 2 247 C3H Transcription Factor Family AT3G63530 51.210 5.14e-88 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g00465 K19045 - psom:113310365 416.001