Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g00456 ATGGATAATTCAGTAATGGGGGGTGGACTTTTGTCGGGCCCCACAGCTGGGATTTTAGAACTAGAACCTTCGATTCATAGACATCAACAGAGCAATTTAGCTCATATGCCACTGCTTTCCCATCACCATCATTTACAGGTTATGAATGCAATGGCTGATCTTGAGAGTGATCACTCGATTGGGTTAATGGAAACCAAGGGCCCTGCCTCAAAGGGTATTTCTATGAGTTGCAGTAAAGGTAAAGGGATTGCTACTACAGCTGCTGCGAATAATAATAGTAACAATAACAATACTAGTGAAGAGGATGAGCCTAGTTTTACAGAAGATGGTAATGATGCACATTTTGCTGGGGTGAGGGGCAAAAAGGGCTCTCCATGGCAACGAATGAAATGGACCGATAACATGGTTAAGCTTTTGATAAAGGTGATTTCTTGCATCGGTGACGATTGTACGCCCGAGGGTGGTGCTGATGGGCTGAAGAGGAAGTCTGTGATCCTGCAAAAGAAGGGAAAATGGAAGACGGTCTCAAAGATAATGATGGAGAGGGGTTGCTACGTGTCTCCTCAGCAGTGTGAGGATAAGTTCAATGACCTGAACAAGAGATACAAGCGGCTGAATGAGATTCTTGGGAGGGGGACTACTTGTAGAGTAGTGGAGAATCCTGTTATCTTGGACTCCATGACCCAGCTTTCAGCAAAAATGAAGGATGATGTCAGGAAAATCTTGAGCTCTAAACACTTGTTTTACAAGGAAATGTGCGCTTACCACAATGGGCAAAGGATACCCAATTGTAATGACTTCGATCTACAAGGGTACTCTTTACCTTTCACAAGGTGCTCAAAGGATGGTAATGGCTTTGAGGAGGCAGAGGACGAGGACAATGAGGACTGCGATGATGACGAATTGGATAATGAAGTTCAAATTAATGGGGACGAAGACACTGAGAGGATGGGTGAGTTCAGCAAGAGGAAGAAGGTGAGTGAAGAGGAGTTGAGTTTCTGGTCACAATCTGGTTTTCACGATAGTTTTGGTGCTGAAATGGCTATGATGCTTCAAGATGCCACAAAATCGCCTTGGGAGCAGCGGGAATGGATTAAGAGCAGGATGCTGCAACTCCAGGAGCAGAGAGTCAGCTTCCAGGCTCAAGCTTTTGAGCTGGAGAAACGTCGTTTTAAGTGGCTGAGATTCTGCAGCAAGAAAGATAGGGAGCTGGAGAGGTTGAGGTTGGATAATGAGAGGATGAGATTAGAGAATGAGCGGATGGCATTGCAAGTGAAGCATAAGGAACTGGAGATTGATTTTAAGAGATCGGAAGCATCTTTGAACCCTGTGTCTCTTGGCGTGGATAGACTTCAAGGAAGGGATCAAATTGAACTGGGCCGAGTTCAATAG 1392 0.4504 MDNSVMGGGLLSGPTAGILELEPSIHRHQQSNLAHMPLLSHHHHLQVMNAMADLESDHSIGLMETKGPASKGISMSCSKGKGIATTAAANNNSNNNNTSEEDEPSFTEDGNDAHFAGVRGKKGSPWQRMKWTDNMVKLLIKVISCIGDDCTPEGGADGLKRKSVILQKKGKWKTVSKIMMERGCYVSPQQCEDKFNDLNKRYKRLNEILGRGTTCRVVENPVILDSMTQLSAKMKDDVRKILSSKHLFYKEMCAYHNGQRIPNCNDFDLQGYSLPFTRCSKDGNGFEEAEDEDNEDCDDDELDNEVQINGDEDTERMGEFSKRKKVSEEELSFWSQSGFHDSFGAEMAMMLQDATKSPWEQREWIKSRMLQLQEQRVSFQAQAFELEKRRFKWLRFCSKKDRELERLRLDNERMRLENERMALQVKHKELEIDFKRSEASLNPVSLGVDRLQGRDQIELGRVQ* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g00456 463 Gene3D - 131 204 - -
Eupl05g00456 463 Pfam Myb/SANT-like DNA-binding domain 128 254 IPR044822 -
Eupl05g00456 463 Coils Coil 369 389 - -
Eupl05g00456 463 Coils Coil 397 433 - -
Eupl05g00456 463 MobiDBLite consensus disorder prediction 86 124 - -
Eupl05g00456 463 MobiDBLite consensus disorder prediction 86 101 - -
Eupl05g00456 463 PANTHER F16F4.11 PROTEIN-RELATED 1 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g00456 Eupl-Chr5 19448776 19451234 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Eupl05g00456 Myb_DNA-bind_4 2.9e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g00456 - - nnu:104590097 620.542