Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Eupl05g00448 | ATGTCAAGGAGGGTTCTTTGCAAGTTCTTTGTACATGGAGCGTGTCTAAAAGGGGAGCACTGTGAGTTCTCACATGATTGGAAGGACCAAGCAAATAATATATGCACCTTCTATCAGAAAGGAGTGTGCTCTTATGGTAGTCGATGCAGATATGAACATGTTAAAGCTTCTCGTCCACAGAATTCTGTCTCATCATCATCATCAAAGTCACACCAGCTTATAGCTTCAGATTCTGTTCAAGTCATCCATCCTTCCAGAATTTCCTTGAGTGAAGAGTCCACTCCAGTCTTGAGTGTTCCTGCAGTGCTTTCAGCCTTGAGTAAACCTTTCTTCCCTCCAGGCACACAAGTATGGAATCAAGATTCTGGTGATTCTAGCTTCTTAGAGAATGAGAATGGCGGGGAGTCTACAACCATTGACCCTGCTGACCAGCCTATTTGTTCGTTTGCCGCTGCTGGTAATTGTCCTCGTGGGGAAAGATGCCCACATATTCATGGGAACTTATGTCCCACCTGCAGAAAATATTGTTTGCATCCATTCAGGCCTGATGAAAGAGAGGAGCACATTAAAACATGCGAGAGAAAGGAAAAACACCTCGAGGCACTTAAACATAGTCAGGAAATAGAGTGCAGTGTGTGCCTGGATCGTGTGCTTTTAAAGCCCACAGCTGCTGAACGGAAGTTTGGATTGCTATCAGAATGTGATCATCCATTCTGCATATCATGTATCAGGAATTGGCGTAGTAATTCCCCCACCTCTGGCATGGATGTCAATACTGCATTAAGGGCCTGCCCAATATGTCGCAAGATCTCATACTTTGTCATTCCAAGTATGATTTGGTATTCTTCAAAAGATGAAAAGCAGGAGATTGTTGACAGCTATAAAGCGAAACTCAGGTCTATTGACTGCAGGTACTTTGACTTTGGAAATGGGACATGCCCCTTTGGGACCAGTTGTTTCTACAAGCATGCATATCGTGATGGCCGTCTGGAAGAAGTGGATCTGCGGCATCTTGGAGCGGAAGATGGAAACACGGTCATAGCCAAAGATGTTAGGCTTTCTGACTTCCTTAGTAACTTGCATCTAAGGTGA | 1092 | 0.4432 | MSRRVLCKFFVHGACLKGEHCEFSHDWKDQANNICTFYQKGVCSYGSRCRYEHVKASRPQNSVSSSSSKSHQLIASDSVQVIHPSRISLSEESTPVLSVPAVLSALSKPFFPPGTQVWNQDSGDSSFLENENGGESTTIDPADQPICSFAAAGNCPRGERCPHIHGNLCPTCRKYCLHPFRPDEREEHIKTCERKEKHLEALKHSQEIECSVCLDRVLLKPTAAERKFGLLSECDHPFCISCIRNWRSNSPTSGMDVNTALRACPICRKISYFVIPSMIWYSSKDEKQEIVDSYKAKLRSIDCRYFDFGNGTCPFGTSCFYKHAYRDGRLEEVDLRHLGAEDGNTVIAKDVRLSDFLSNLHLR* | 364 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Eupl05g00448 | 363 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 194 | 278 | IPR013083 | - | |
Eupl05g00448 | 363 | Pfam | RNA-binding, Nab2-type zinc finger | 302 | 324 | - | - | |
Eupl05g00448 | 363 | SMART | ring_2 | 210 | 267 | IPR001841 | - | |
Eupl05g00448 | 363 | PANTHER | MAKORIN-RELATED | 5 | 344 | IPR045072 | GO:0000209|GO:0061630 | |
Eupl05g00448 | 363 | Pfam | Zinc finger, C3HC4 type (RING finger) | 210 | 267 | IPR018957 | GO:0046872 | |
Eupl05g00448 | 363 | Gene3D | - | 1 | 30 | - | - | |
Eupl05g00448 | 363 | ProSiteProfiles | Zinc finger RING-type profile. | 210 | 268 | IPR001841 | - | |
Eupl05g00448 | 363 | SUPERFAMILY | CCCH zinc finger | 31 | 53 | IPR036855 | GO:0046872 | |
Eupl05g00448 | 363 | SUPERFAMILY | CCCH zinc finger | 4 | 26 | IPR036855 | GO:0046872 | |
Eupl05g00448 | 363 | SUPERFAMILY | RING/U-box | 198 | 274 | - | - | |
Eupl05g00448 | 363 | ProSiteProfiles | Zinc finger C3H1-type profile. | 141 | 168 | IPR000571 | GO:0046872 | |
Eupl05g00448 | 363 | Pfam | CCCH-type zinc finger | 6 | 26 | IPR041367 | - | |
Eupl05g00448 | 363 | Pfam | CCCH-type zinc finger | 34 | 53 | IPR041367 | - | |
Eupl05g00448 | 363 | SMART | c3hfinal6 | 142 | 167 | IPR000571 | GO:0046872 | |
Eupl05g00448 | 363 | SMART | c3hfinal6 | 297 | 325 | IPR000571 | GO:0046872 | |
Eupl05g00448 | 363 | SMART | c3hfinal6 | 31 | 55 | IPR000571 | GO:0046872 | |
Eupl05g00448 | 363 | SMART | c3hfinal6 | 2 | 27 | IPR000571 | GO:0046872 | |
Eupl05g00448 | 363 | ProSiteProfiles | Zinc finger C3H1-type profile. | 297 | 326 | IPR000571 | GO:0046872 | |
Eupl05g00448 | 363 | ProSiteProfiles | Zinc finger C3H1-type profile. | 1 | 28 | IPR000571 | GO:0046872 | |
Eupl05g00448 | 363 | ProSitePatterns | Zinc finger RING-type signature. | 234 | 243 | IPR017907 | - | |
Eupl05g00448 | 363 | ProSiteProfiles | Zinc finger C3H1-type profile. | 29 | 56 | IPR000571 | GO:0046872 | |
Eupl05g00448 | 363 | CDD | RING-HC_MKRN | 208 | 268 | - | - | |
Eupl05g00448 | 363 | Gene3D | - | 31 | 169 | - | - |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C3H | Eupl05g00448 | zf-C3HC4 | 1.4e-06 | CL0229 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Eupl05g00448 | K15687 | - | ming:122056960 | 627.476 |