Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g00440 ATGTACCTACATCGTCTTCACCAAGATAAGATGTCACTCTTTAGTAGATTCTTTTATCGAAGACCTCCTGACGGCTTGCTAGAATTTGTTGACAGAGTATATGTTTTTGATTCTTGCTTTTCGACGGAAGTCTTACCAGATGGGATGTACCATATTTACTTGCATGAAATTATAACTGAGCTACATGAAGAATACACAGATTCATCCTTTCTTGCATTCAATTTTCGAGAAGGAGAGAAGAGAAGCCAGTTTGCCGAAATTCTGTGTGAGTATGATATCACCATCATGGATTATCCACGGCAATACGAAGGTTGCCCCCTCCTTCCGCTGTCTTTGATTCAGCATTTCCTACGTGTTTGTGAGAGTTGGTTATCTCTGGGAAATCATCAAAATATTATTTTGCTCCACTGTGAGAGAGGAGGTTGGCCGCTTTTAGCGTTCCTTTTAGCTAGCTTTCTGATTTTCAGAAAGTTACACAGTGGTGCGCAGAAGACTCTTGAAATTGTCCATCGGGAGGCTCCTAAAGGCCTTTTACAGCTTCTATCACCTTTGAACCCGTTCCCATCACAGCTTCGTTACCTTCAGTATGTAACTAGGAGAAATATATCTCCAGAATGGCCACCTACAGAGCGGGCTCTGTCCTTGGATTGTCTCATTCTTCGAGCCATTCCAAGCTTTGATTCCCATAATGGATGTAGGCCAATAATCCGGATTTTTGGTAGAAATCTCCTTAGCAAGGGTGGGCTTTCAACGCAGATGCTTTTCTCCATGCCCAAGAAAAAGAAATCCCTGCGACATTACGGACAGGTGGACTGTGATGTAATTAAAATTGACATCCAATGTTTGGTTCAAGGAGATGTCGTCTTGGAGTGTCTCCACTTAGACTTGGATTCGGAAAGAGAAGTTATGATGTTTCGTATAATGTTCAACACTGCTTTTATTCGATCCAACATATTGATGTTGAACTGCGAGGACCTTGACATGCTTTGGGATTCAAAGGAGCGTTATCCAAAAGGTTTTCGAGCTGAGGTTTTGTTTGGTGAGGTTGAGAGCATCTCTCCTCCTAGAGCTCCAACCGTAACTTTAAATGGTGAGGAGAAAGGTGGATTGCCCATTGAAGCTTTTTCAAGGGTTCAAGAACTTTTTAGTGGTGTTGAATGGGTCGATAGTGGTGGTGACGCTGCTTTGTGGTTACTCAAGCAAATTTCTGCAAATGCTCTACAAGAAAAAATTGAAAAACTAATTTTAAGTGATGCGAAGGAATTGTCAAGATTGCAAAGTAAGGTTAGCGTACAAACATCACCTGTAGAATCTGAAGAAGAAGATGACGCTCCTAAGACTGCTGATATTGTGGAAAAGGTTCCACATTCGACAAACATTACCACACCTCATGTGAGTTTCCTCGACGATCTTGTAGCTCAAGATCTTGCCTTAGAGGATATTATGCTTCCACATGATACTACTCCCCAGCCTTACGCAGTTTCAATGCCGAATGCACTTGATTCTGTACTTTCACCTTTTCAAAGTGATGTTCCTATCTCTGTCACTCCACCTCCTCCTCCACCACCTCTGCCTGCATGTCTACAAACAACACCGGCTATAAGCATTGGTGATGCTCCTCCACCCCCCCCACCCCCCCCACCTCTTCCTTCAAGCAAAGGGATCCCCCAACTATCTCCACCACCACCTCCTCCACCTCCACCACCTTTCTCAACAACATATACCACATGCCCTCCACCCCCTCCAATAATCTCTAGGCATTGTCAACCCACAACAACAACTACCCCACTAATTGTTGGTAGAGCTCCTCCTCCACCACCACCACCACCACCTCCCCCTCTCCCTCCTTCTATTATTTCTGGTAAGCTTTCTCTAACCTCACATCCGCATCCCCCTATCACTTTTAGTAGAGGGCCTCCACCTCCACCACCGCCTCCACCTCCCCCTATCATTTTTAGTAGAGGGTCTCCACCTCCACCTCCACCTCCACCTTTAATTGTTGGTAGAGACCCTCCACCCTCGCCTCCACCTCTCCCTACTGTTTATAGTAGAGGCCCTCCGCCACCGCCTCCCCCTCGTATTTTGGGTAGAGATTCTCCACCTCCACCTCCCCCTAATAGTAGAGCTCCTCCACCACCTCCTCCACCTCCCCCTACAATTTCTAGTAGAGGCCCTCCACAACCTCCTCCACCTCCCCCTACTATCTCTGCTAGATGTCCTCCACCACCTCCTCCACCTCCCCCTACAATTTCTAGTAGAGGCCCTCCACAACATCCGCCCCCTCCAACGCCGCCTCCACCTCCCCCTACTGTCTCTAGTAGACGGCCTCCACCACCTCCTCCACCTCCCCCCTCTAGCTCTAGTAGTGTTCGACAGCCACCTCTACCACCGCCGCCACCACCTCCACCCCTCACCACATCTAAAGGCCCCCCTCTACCACCACCACCACCTCCTTTGAGTTCAGGTCATGTAGGGAAAATGTCTAGCACTAGTTCCATTCGTGGGGCACCACCTCCGCCTCCTCCACCTCCTTTAGGTTCTTCTCGGCAAGGTCCAATTCCTCCACCGCCACCACAAGCACCAAAGACTGCTGGTGTTGTGCCCCCTCCCCCGTCTAGTCGTGCAAACCCACCTGGTCCACCTCCGCCCCCAGGAGCGAAGGGTTCTGGTGCGCCACCCCCACCGCCACCATTAAGGGGAAGAGCCTCATCAGGACCAGCTATTCCAAGTCATGGAAGAGGTCGTGGAGTTGCCGCTGCCACTAGTGCACCTAAAAAAGCTTCTTTAAAACCATTACATTGGGTGAAAGTATCTCGAGCAATGCAAGGGAGTTTATGGGCTGATTCTCAAAAACAGGAAGATCAGACAAGGGCCCCTGAAATAGATATTTCAGAACTTGAAAGTCTGTTCTCAGCAACTGTCGCTTCTGATGGGAGTGGCACCAACAAAGGTGGAATTCGACGTGGTTCTAATGCCAACAAACCAGAGATGGTGCAATTGGTTGACCTGCGCAGAGCATATAATTGTGAAATAATGCTTACAAAAATTAAAATGCCTCTGCCTGATATGATTCGTGCAGTGTTGGCTTTGGATACCTCGGCCTTAGACATTGATCAAGTTGAGAATCTCATCAAATTTTGTCCTACAAAAGAAGAAATGGAGATGTTGAAGAATTATACTGGAAACAAGGAAATGCTTGGAAAGTGTGAGCAGTTTTTTCTGGAGCTGATGAAGGTACCTCGAGTAGAATCCAAGTTACGAGTATTTTCATTCACCATCACGTTTTCTACTCAGGTGAAGGACTTGCGATATAATTTGAATACAATTAACAATGCTTCTAGAGAGGTAAAAGATTCTGTAAAATTGCGGCAGATAATGCAGACAATTCTTACTTTGGGAAATGCATTGAATCAGGGCACAGCACGAGGATCTGCTATAGGATTTAAACTGGACAGCCTTCTTAAACTGTCAGATACTCGTGCAAGAAACAATAAAATGACTCTAATGCATTATTTATGCAAGGTCCTTGCTGAGCAAATGCTAGAGGTGCTGGATTTTGACAAGGATCTAGTTCATTTAGAATCAGCTTCTAAGATCCAACTGAAGTCTTTAGCTGAAGAAATGCAAGCAGTAAGTAAGGGTCTTGAAAAGGTCGAGCAAGAACTCACTGCCTCAGAAAATGATGGTGCCATCTCCATGGGCTTTCAGAAGGCTTTAAAGAATTTCCTTGATACCGCTGAAGCTGAAGTAAGGTCACTTATATCCTTGTATTCTGAAGTGGGAAGAAATGCAGATTCTCTATCTCAATATTTCGGGGAGGATCCAGCTCGTTGTCCCTTTGAGCAAGTGACATCGATCTTGGTAATCTTCGTTAAGACATTCAATAAATCACGTGAGGAGAATGCTAAGCAGGCTGATGCTGAAAAGAAGAAACTGGAAAAAGAAGCCATGAAAGAACGGGCAAATACTTCTTCAAGAAGATAA 3984 0.4608 MYLHRLHQDKMSLFSRFFYRRPPDGLLEFVDRVYVFDSCFSTEVLPDGMYHIYLHEIITELHEEYTDSSFLAFNFREGEKRSQFAEILCEYDITIMDYPRQYEGCPLLPLSLIQHFLRVCESWLSLGNHQNIILLHCERGGWPLLAFLLASFLIFRKLHSGAQKTLEIVHREAPKGLLQLLSPLNPFPSQLRYLQYVTRRNISPEWPPTERALSLDCLILRAIPSFDSHNGCRPIIRIFGRNLLSKGGLSTQMLFSMPKKKKSLRHYGQVDCDVIKIDIQCLVQGDVVLECLHLDLDSEREVMMFRIMFNTAFIRSNILMLNCEDLDMLWDSKERYPKGFRAEVLFGEVESISPPRAPTVTLNGEEKGGLPIEAFSRVQELFSGVEWVDSGGDAALWLLKQISANALQEKIEKLILSDAKELSRLQSKVSVQTSPVESEEEDDAPKTADIVEKVPHSTNITTPHVSFLDDLVAQDLALEDIMLPHDTTPQPYAVSMPNALDSVLSPFQSDVPISVTPPPPPPPLPACLQTTPAISIGDAPPPPPPPPPLPSSKGIPQLSPPPPPPPPPPFSTTYTTCPPPPPIISRHCQPTTTTTPLIVGRAPPPPPPPPPPPLPPSIISGKLSLTSHPHPPITFSRGPPPPPPPPPPPIIFSRGSPPPPPPPPLIVGRDPPPSPPPLPTVYSRGPPPPPPPRILGRDSPPPPPPNSRAPPPPPPPPPTISSRGPPQPPPPPPTISARCPPPPPPPPPTISSRGPPQHPPPPTPPPPPPTVSSRRPPPPPPPPPSSSSSVRQPPLPPPPPPPPLTTSKGPPLPPPPPPLSSGHVGKMSSTSSIRGAPPPPPPPPLGSSRQGPIPPPPPQAPKTAGVVPPPPSSRANPPGPPPPPGAKGSGAPPPPPPLRGRASSGPAIPSHGRGRGVAAATSAPKKASLKPLHWVKVSRAMQGSLWADSQKQEDQTRAPEIDISELESLFSATVASDGSGTNKGGIRRGSNANKPEMVQLVDLRRAYNCEIMLTKIKMPLPDMIRAVLALDTSALDIDQVENLIKFCPTKEEMEMLKNYTGNKEMLGKCEQFFLELMKVPRVESKLRVFSFTITFSTQVKDLRYNLNTINNASREVKDSVKLRQIMQTILTLGNALNQGTARGSAIGFKLDSLLKLSDTRARNNKMTLMHYLCKVLAEQMLEVLDFDKDLVHLESASKIQLKSLAEEMQAVSKGLEKVEQELTASENDGAISMGFQKALKNFLDTAEAEVRSLISLYSEVGRNADSLSQYFGEDPARCPFEQVTSILVIFVKTFNKSREENAKQADAEKKKLEKEAMKERANTSSRR* 1328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g00440 1327 Coils Coil 1295 1322 - -
Eupl05g00440 1327 Pfam Formin Homology 2 Domain 922 1294 IPR015425 -
Eupl05g00440 1327 PANTHER FORMIN-J 837 1322 - -
Eupl05g00440 1327 MobiDBLite consensus disorder prediction 512 528 - -
Eupl05g00440 1327 SMART PTEN_C2_2 208 348 IPR014020 -
Eupl05g00440 1327 SUPERFAMILY Formin homology 2 domain (FH2 domain) 932 1314 - -
Eupl05g00440 1327 Coils Coil 1201 1228 - -
Eupl05g00440 1327 Gene3D Protein tyrosine phosphatase superfamily 25 201 IPR029021 -
Eupl05g00440 1327 MobiDBLite consensus disorder prediction 834 902 - -
Eupl05g00440 1327 Pfam C2 domain of PTEN tumour-suppressor protein 210 347 IPR014020 -
Eupl05g00440 1327 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 25 197 IPR029021 -
Eupl05g00440 1327 MobiDBLite consensus disorder prediction 599 618 - -
Eupl05g00440 1327 ProSiteProfiles Formin homology-2 (FH2) domain profile. 919 1320 IPR015425 -
Eupl05g00440 1327 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 212 349 IPR035892 -
Eupl05g00440 1327 MobiDBLite consensus disorder prediction 633 821 - -
Eupl05g00440 1327 Gene3D Formin, FH2 domain 917 1306 IPR042201 -
Eupl05g00440 1327 MobiDBLite consensus disorder prediction 427 449 - -
Eupl05g00440 1327 MobiDBLite consensus disorder prediction 1298 1327 - -
Eupl05g00440 1327 Gene3D - 207 352 - -
Eupl05g00440 1327 ProSiteProfiles C2 tensin-type domain profile. 210 349 IPR014020 -
Eupl05g00440 1327 SMART it6_source 536 1327 IPR015425 -
Eupl05g00440 1327 MobiDBLite consensus disorder prediction 511 927 - -
Eupl05g00440 1327 MobiDBLite consensus disorder prediction 536 586 - -
Eupl05g00440 1327 FunFam Formin-like protein 918 1306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g00440 Eupl-Chr5 18611047 18644195 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g00440 11 449 FH2 protein (formin) Gene Family AT1G31810 73.121 0.0 712
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g00440 - - tss:122656375 856.67