Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g00438 ATGGCGAACAGGAGAGTTGAAAAAATGGAGCATGACGAGACAGGATGCCAAGCTCCTGAAGGTCCCATTCTCTGCGTTAACAACTGCGGGTTCTTTGGAAGTGCGGCTACCATGAACATGTGTTCCAAGTGCCACAAGGACTTGGTGTTGAAGCAGGAACATGCCAAACTCGCAGCATCATCTTTTGGGAGTATTGTGAATGGCAACACTAGCAGTAATGGAAAGGAGCCGATCGTTACTGGTCCTGTGGATGTACCGGTTGGTTCAGTGGAGCCGAAGATCATCTCAACGCAGGTGTCCTGTGCTTCAGCCTCAAGCGAGGGTGGTGAGATGAAGGCGAAAGAGGGTCCAAATAGGTGCAACACTTGCAGGAAGCGTGTTGGGTTAATGGGGTTCAATTGTCGATGTGGAAGCCTTTTCTGTGCAGTTCATCGATACTCTGATAAACACGGTTGCCCCTTCGACTATCGGACTGCTGCTCGGGATGCTATAGCCAAAGCAAACCCTGTTGTCAAGGCTGAAAAGCTCGACAAGATTTAG 540 0.4981 MANRRVEKMEHDETGCQAPEGPILCVNNCGFFGSAATMNMCSKCHKDLVLKQEHAKLAASSFGSIVNGNTSSNGKEPIVTGPVDVPVGSVEPKIISTQVSCASASSEGGEMKAKEGPNRCNTCRKRVGLMGFNCRCGSLFCAVHRYSDKHGCPFDYRTAARDAIAKANPVVKAEKLDKI* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g00438 179 Pfam AN1-like Zinc finger 120 156 IPR000058 GO:0008270
Eupl05g00438 179 ProSiteProfiles Zinc finger AN1-type profile. 114 160 IPR000058 GO:0008270
Eupl05g00438 179 Gene3D - 95 175 IPR035896 -
Eupl05g00438 179 SMART AN1_Zf_4 120 157 IPR000058 GO:0008270
Eupl05g00438 179 FunFam Zinc finger AN1-type containing 6 95 175 - -
Eupl05g00438 179 SUPERFAMILY AN1-like Zinc finger 107 174 IPR035896 -
Eupl05g00438 179 Gene3D - 8 71 - -
Eupl05g00438 179 ProSiteProfiles Zinc finger A20-type profile. 19 53 IPR002653 GO:0003677|GO:0008270
Eupl05g00438 179 PANTHER AN1-TYPE ZINC FINGER PROTEIN 20 179 - -
Eupl05g00438 179 SMART A20_3 22 46 IPR002653 GO:0003677|GO:0008270
Eupl05g00438 179 Pfam A20-like zinc finger 23 46 IPR002653 GO:0003677|GO:0008270
Eupl05g00438 179 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 24 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g00438 Eupl-Chr5 18481409 18485490 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g00438 12 179 C2H2 Transcription Factor Family AT3G52800 45.238 9.00e-42 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g00438 - - nnu:104613026 310.071