Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g00437 ATGGCTACCACCTTCACATCTCTGTTCTTCTATGCTCTTTTCATCTCAGTTTTCATCCTTAGTTCTGCTCTAGAAGAAACACAGATCTTACTCACCTTCAAGACCTTCATTGAAGACCCAATGAACACTCTCTCCACCTGGTCCAACACCTCACAGATCCATGTCTGCAACTGGACTGGTATCACCTGCACCACTACATCTTCCCCCTCAGTCGCCTCTATCAATCTCCAAGGTCTCAACCTCTCTGGCCAAATCTCTCCTTCAATCTGTCAACTCTCCAATCTTTCTCATCTCAACCTTGCTAACAATCTCTTTAATCAACCCATCCCACTTCATCTTTCTCAATGCAGTTCCTTGGAGACACTGAATCTTAGTAACAATCTCATATGGGGAACAATCCCAGATCAGATTTCTCTGTTTAGTTCCTTGCGAGTGCTTGATTTCAGCAAAAACCATGTTGAAGGAAGAATTCCTGACAGCCTAGGATCTTTGAAGAACCTACAAGTTATCAACTTGGGGAGCAACTTGTTTTCAGGTAGTGTTCCTTCTGTTTTTGGGAATTTGAGTGAGCTTCTTGTTCTTGATTTGTCTGAAAATGCATTATTGTTGAGTGAGATACCTAGAGAGATTGGGAAACTTGAGAAACTTCAGAAGCTTTTGTTGCAGAGATCTGGTTTTTATGGTTTGATTCCTGATACTTTTGTGGGTTTACATGGGTTAGAGGTTTTAGACCTTTCTGAGAACAATTTAACAAATGGGATTCCTCTGAGACTTGGGATGAGTCTTGAGAATCTGAAATCTTTTGATGTTTCAGAGAACAAGCTAACCGGGTCATTCCCCACTGGTATCTGCAGTGGAAAAGGCCTTATTTATCTGAGTCTCCATACAAATTTCTTCACTGGTTCGATATCCGATTCACTCAATGAATGCTTGAATCTTGAGAGATTTCAAGTTCAAAACAATGGGTTTTTTGGGGATTTTCCAAATGGGATATGGTCACTGCCAAAGATCAGGCTTATCAGAGCCGAAAACAATAGGTTTTCGGGAGAAATACCCGATTCGATATCCATGGCTGCTCGACTGGAGCAAGTTCAGATAGATAACAACATCTTTACCAGTAAAATTCCTCAGGGTCTTGGGTTGGTTAGGAGTCTGTATAGGTTCTCTGCATCTCTTAATAGTCTTTATGGAGATCTTCCTCATAACTTCTGTGACTCCCCTGTAATGAGTATCATTAACCTTTCAAGCAATTCGCTCTCTGGTACAATTCCGGAGCTTACGAAATGCAGAAAACTAGTCTCATTGTCTTTAGCAGATAACAGTCTCATCGGAGTTATCCCGGCTTCTCTGGCTGAATTACCAGTGCTAACCTACCTTGATCTTTCCGATAATAATCTCACTGGTTCAATCCCACAAGGGCTACAGAATCTAAAGCTTGCCCTGTTCAATGTCTCTTTCAACCGACTCTCTGGTGAGGTTCCCTTCTCTCTAATTTCTGGCCTTCCAGCTTCATTCCTGCAAGGAAACCCCGACCTCTGTGGGCCTGGATTACCCAATTCTTGTTATGATGAGAAGCCGAAACAACACTCCGTTCGGCCATCAAAGTTGACCTGCACTCTGATCTCGATTGCTTTTGCTGCCGTAATTGTGGTTGTTGCTGCTGGATTCTACGTGATGTACCGATCTTCCAAACTAAAATTTCGTCCAGGTAGTTGGAACTCAGTGTTCTTCTATCCCCTGAGAATAACTGAACAGGATTTGATAATGGGAATGGATGAGAAAAGTGCTGTAGGTAATGGAGGAGCATTTGGCAGAGTTCACATTATAAGATTGCCTAGTGGTGAATTTGTTGCTGTAAAGAAGCTAATGAACAGTGGGAGTCTGTCTCTGAAAGCTTTGAAAGCTGAGATCAAGATATTGGCGAAGATCAGACATAGAAACATCACTAAACTGTTGGGATTTTGCCACTCGGAAGAGTCAATCTTTCTGATTTATGAGTTTATGCAGAAGGGGAGCTTAGGAGATTTAATTTGCAGATCAGATATTCCATTAGAATGGAGTGTTAGGTTGAGGATAGCTATTGGAGTTGCTCGAAGTCTGGCTTACCTTCACAAGGACTATGTTCCACACTTACTTCACAGGAACATCAAATCGAAAAACATTCTTCTGGATGCGGATTTTGAACCGAAGGTCACAGATTTTGCGCTTGATCGGATTGTTGGAGAGTCTGCATATCAGTCATCAGTTGCTTCAGAAATGGGTTCCTTTTGTTACATGGCACCAGAACATGGATACAGTAAGAAGGCTACTGAGAAAATGGATGTTTACAGCTTTGGGGTCGTTTTATTAGAGCTCATAACTGGCAGGCAAGCCGAGCAGGCAGAGTCAGGGGACTCCCTTGATGTTGTGAAGTGGGTTCGAAGGAAAATTAACACGACTAATGGAGCAATCCAAGTCCTGGATCCCAAGATCTCCAATTCATCCAAACAGGAGATGTTGGGAGCTCTAGAAGTCGCCCTCTGTTGCACTTCAGTCGTACCAGAGAAACGGCCAACGATGTTTGAGGTCGTCAGATCACTTCAATCACTTGAATCTAAGACCCATCTCCCAAGTGTATTTTCTGGCGACGGCAAGTTCTCCACCTCTGACGAGCATTTAGTCCGAAGCTTATCTTAA 2676 0.4275 MATTFTSLFFYALFISVFILSSALEETQILLTFKTFIEDPMNTLSTWSNTSQIHVCNWTGITCTTTSSPSVASINLQGLNLSGQISPSICQLSNLSHLNLANNLFNQPIPLHLSQCSSLETLNLSNNLIWGTIPDQISLFSSLRVLDFSKNHVEGRIPDSLGSLKNLQVINLGSNLFSGSVPSVFGNLSELLVLDLSENALLLSEIPREIGKLEKLQKLLLQRSGFYGLIPDTFVGLHGLEVLDLSENNLTNGIPLRLGMSLENLKSFDVSENKLTGSFPTGICSGKGLIYLSLHTNFFTGSISDSLNECLNLERFQVQNNGFFGDFPNGIWSLPKIRLIRAENNRFSGEIPDSISMAARLEQVQIDNNIFTSKIPQGLGLVRSLYRFSASLNSLYGDLPHNFCDSPVMSIINLSSNSLSGTIPELTKCRKLVSLSLADNSLIGVIPASLAELPVLTYLDLSDNNLTGSIPQGLQNLKLALFNVSFNRLSGEVPFSLISGLPASFLQGNPDLCGPGLPNSCYDEKPKQHSVRPSKLTCTLISIAFAAVIVVVAAGFYVMYRSSKLKFRPGSWNSVFFYPLRITEQDLIMGMDEKSAVGNGGAFGRVHIIRLPSGEFVAVKKLMNSGSLSLKALKAEIKILAKIRHRNITKLLGFCHSEESIFLIYEFMQKGSLGDLICRSDIPLEWSVRLRIAIGVARSLAYLHKDYVPHLLHRNIKSKNILLDADFEPKVTDFALDRIVGESAYQSSVASEMGSFCYMAPEHGYSKKATEKMDVYSFGVVLLELITGRQAEQAESGDSLDVVKWVRRKINTTNGAIQVLDPKISNSSKQEMLGALEVALCCTSVVPEKRPTMFEVVRSLQSLESKTHLPSVFSGDGKFSTSDEHLVRSLS* 892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g00437 891 FunFam Leucine-rich repeat family protein 25 182 - -
Eupl05g00437 891 Pfam Leucine rich repeat N-terminal domain 25 63 IPR013210 -
Eupl05g00437 891 SUPERFAMILY L domain-like 25 284 - -
Eupl05g00437 891 Gene3D Ribonuclease Inhibitor 23 181 IPR032675 -
Eupl05g00437 891 Gene3D Transferase(Phosphotransferase) domain 1 669 874 - -
Eupl05g00437 891 ProSiteProfiles Leucine-rich repeat profile. 118 140 IPR001611 GO:0005515
Eupl05g00437 891 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 11 862 - -
Eupl05g00437 891 FunFam probably inactive leucine-rich repeat receptor-like protein kinase At5g06940 582 667 - -
Eupl05g00437 891 Pfam Protein kinase domain 594 858 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl05g00437 891 CDD STKc_IRAK 597 863 - -
Eupl05g00437 891 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 668 868 - -
Eupl05g00437 891 SMART LRR_typ_2 237 261 IPR003591 -
Eupl05g00437 891 SMART LRR_typ_2 262 286 IPR003591 -
Eupl05g00437 891 SMART LRR_typ_2 188 213 IPR003591 -
Eupl05g00437 891 SMART LRR_typ_2 164 187 IPR003591 -
Eupl05g00437 891 SMART LRR_typ_2 92 116 IPR003591 -
Eupl05g00437 891 SMART LRR_typ_2 453 476 IPR003591 -
Eupl05g00437 891 SMART LRR_typ_2 117 140 IPR003591 -
Eupl05g00437 891 Gene3D Ribonuclease Inhibitor 182 236 IPR032675 -
Eupl05g00437 891 SUPERFAMILY Protein kinase-like (PK-like) 600 868 IPR011009 -
Eupl05g00437 891 ProSiteProfiles Leucine-rich repeat profile. 455 478 IPR001611 GO:0005515
Eupl05g00437 891 Gene3D Phosphorylase Kinase; domain 1 597 668 - -
Eupl05g00437 891 Pfam Leucine rich repeat 215 275 IPR001611 GO:0005515
Eupl05g00437 891 Pfam Leucine rich repeat 142 201 IPR001611 GO:0005515
Eupl05g00437 891 Pfam Leucine rich repeat 430 489 IPR001611 GO:0005515
Eupl05g00437 891 SUPERFAMILY L domain-like 203 518 - -
Eupl05g00437 891 FunFam Probably inactive leucine-rich repeat receptor-like protein kinase At5g06940 261 524 - -
Eupl05g00437 891 Gene3D Ribonuclease Inhibitor 240 524 IPR032675 -
Eupl05g00437 891 ProSiteProfiles Protein kinase domain profile. 592 863 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g00437 Eupl-Chr5 18385223 18388978 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g00437 25 863 Receptor kinase-like Gene Family AT5G06940 61.967 0.0 1032
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Eupl05g00437 Pkinase 3.3e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g00437 - - nnu:104597439 1329.69