Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g00434 ATGGACTTGGCCAAACCAAGCAATAATATGCCATCTGGGCCTGAAAGAGCCAAAATTGTCAAGCGTGAAGGAAGCCGCAAGGGATCAACATCTAGTTCAGAACATGAAGGACCCAAAACACCAGACCCTAAAACATTGAGAAGGCTTGCTCAGAATAGAGAAGCTGCTCGGAAAAGCCGACTAAGAAAGAAGGCTTATGTTCAGCAGCTAGAGTCAAGTAGGATTAAACTAACTCAGCTGGAACAAGAGCTCCAAATGGCTAGGACACAAGGTGTGTTCTTCGGTGGAGGAGACCAAGGTCTCCCTGCTGGTACTAGCAATCTCACCTCAGAAGCTGCGGTTTTCGACATGGAATACGCGAGGTGGATCGAAGAGCACCACAGGCTCATGTATGAGCTTCGAGCTGCAGTGCAAGAACACTTGCCAGAGAACGAGCTACGACTCTTTGTAGACAATTGCCTTGCACACTATGACGAGATGATGATCCTCAAGAGCATGGTCGTGAAATCCGACGTGTTTCATCTCGTTTCCGGCATGTGGAAGACTCCGGCCGAGCGCTGTTTCATGTGGATGGGTGGATTCCGGCCTTCGGCACTTATCAAGATTCTTCTGAATCATATCGAGCCGTTGACGGAGCAACAGATCTTGGGAATATGTGGACTCCAACAATCTACACAGGAGGCTGAGGAAGCTCTAACTCAAGGGCTTGATGCTCTCCACCAGTCACTATCGGACACCATTGCTTCTGATTCACTGAGCTACCTTTCTAACATGGGCAATTACATGGGAAACTACATGGGCCAGATGGCCACAGCCATGAACAAGCTATCTACTTTAGAAGGTTTTGTTAGACAGGCTGATAATCTGAGGCACCAGACCATTCACCGGCTTCACCAGATCCTGACCACCCGTCAATCTGCGAGGTGTTTCTTAGCGATCTCTGAGTACTTCTATCGACTTCGTGCTCTCAGCTCTCTCTGGCTGTCTCGCCCTAGACAGGAATAA 1005 0.4886 MDLAKPSNNMPSGPERAKIVKREGSRKGSTSSSEHEGPKTPDPKTLRRLAQNREAARKSRLRKKAYVQQLESSRIKLTQLEQELQMARTQGVFFGGGDQGLPAGTSNLTSEAAVFDMEYARWIEEHHRLMYELRAAVQEHLPENELRLFVDNCLAHYDEMMILKSMVVKSDVFHLVSGMWKTPAERCFMWMGGFRPSALIKILLNHIEPLTEQQILGICGLQQSTQEAEEALTQGLDALHQSLSDTIASDSLSYLSNMGNYMGNYMGQMATAMNKLSTLEGFVRQADNLRHQTIHRLHQILTTRQSARCFLAISEYFYRLRALSSLWLSRPRQE* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g00434 334 MobiDBLite consensus disorder prediction 1 47 - -
Eupl05g00434 334 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 47 62 IPR004827 GO:0003700|GO:0006355
Eupl05g00434 334 SMART brlzneu 40 121 IPR004827 GO:0003700|GO:0006355
Eupl05g00434 334 Coils Coil 63 90 - -
Eupl05g00434 334 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 42 85 IPR004827 GO:0003700|GO:0006355
Eupl05g00434 334 Pfam Seed dormancy control 130 204 IPR025422 GO:0006351|GO:0043565
Eupl05g00434 334 SUPERFAMILY Leucine zipper domain 44 85 IPR046347 GO:0003700|GO:0006355
Eupl05g00434 334 Pfam bZIP transcription factor 44 83 IPR004827 GO:0003700|GO:0006355
Eupl05g00434 334 FunFam BZIP family transcription factor 43 92 - -
Eupl05g00434 334 ProSiteProfiles DOG1 domain profile. 112 330 IPR025422 GO:0006351|GO:0043565
Eupl05g00434 334 CDD bZIP_HBP1b-like 44 96 - -
Eupl05g00434 334 PANTHER TRANSCRIPTION FACTOR TGA9 26 333 - -
Eupl05g00434 334 Gene3D - 43 91 - -
Eupl05g00434 334 MobiDBLite consensus disorder prediction 16 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g00434 Eupl-Chr5 18275993 18281780 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g00434 14 334 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT5G06839 71.125 5.65e-173 486
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Eupl05g00434 DOG1 4.7e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g00434 K14431 - ming:122061406 543.117