Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g00428 ATGATTACAGGGCACGCTGCAAACTTTATTCCCACAATTGAGAAGGGTGTTTTGAAGAAGCAAGCGACTCCAACAAAGCCCGTAATATTGGAACCTATGATGCTGGTGGAATTGAAGGCACCTACAGAAATCCAAGTTACTAGTGACACAAACCTGCACGCTAGGAGGCCTTCTACTGCATTGTCTCCAGAAGATCTCACAGATGCGGAATGGTACTACTTGGTTTGCATGTCCTTCACATTCAATCCTGGCCAGGAGTACTTGTCTCTTCTTCATGGGTTTGAACTTGAACTTCTGGATAATTTCTATGTACTAGTCTTGGTTGCTAATGGTTTAAAATCCAGCTTTGTTTTCTTTTCCCTTAGTTAA 369 0.4228 MITGHAANFIPTIEKGVLKKQATPTKPVILEPMMLVELKAPTEIQVTSDTNLHARRPSTALSPEDLTDAEWYYLVCMSFTFNPGQEYLSLLHGFELELLDNFYVLVLVANGLKSSFVFFSLS* 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g00428 122 PANTHER TRANSCRIPTION FACTOR TT8 47 87 - -
Eupl05g00428 122 Coils Coil 121 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g00428 Eupl-Chr5 17839375 17840880 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g00428 55 85 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G63650 74.194 4.19e-11 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g00428 - - pcin:129290210 70.8626