Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g00421 ATGGTGGAAAAGTCGAACAAAGGAAGAAAGGAGGAAGTTGTGACCAGAGAATACACGATTAATCTCCATAAACGCGTACATGGATGTACGTTCAAGAAGATGGCTCCCAAAGCCATAAAGGAAATCAGGAAGTTTGCCCAGAAGGCAATGGGAACAACCGACGTGAGAGTGGATGTGAAACTGAACAAGCACATATGGAGTCGGGGGATCCGGAGTGTGCCGAGGCGAGTCCGGGTGCGCATTGCACGCAAGAGGAATGACGAGGAGGATGCCAAGGAGGAGCTCTACTCACTGGTCACAGTTGCAGAGATACCAGCGGAGGGGCTGAAAGGATTAGGCACCAAGGTCATTGAGGAAGGAGATTGA 366 0.5055 MVEKSNKGRKEEVVTREYTINLHKRVHGCTFKKMAPKAIKEIRKFAQKAMGTTDVRVDVKLNKHIWSRGIRSVPRRVRVRIARKRNDEEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEGD* 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g00421 121 SMART Ribosomal_L31e_2 11 94 IPR000054 GO:0003735|GO:0005840|GO:0006412
Eupl05g00421 121 Gene3D - 10 120 IPR023621 -
Eupl05g00421 121 FunFam 60S ribosomal protein L31 7 120 - -
Eupl05g00421 121 CDD Ribosomal_L31e 10 93 IPR000054 GO:0003735|GO:0005840|GO:0006412
Eupl05g00421 121 Pfam Ribosomal protein L31e 12 93 IPR000054 GO:0003735|GO:0005840|GO:0006412
Eupl05g00421 121 PANTHER 60S RIBOSOMAL PROTEIN L31 3 119 IPR000054 GO:0003735|GO:0005840|GO:0006412
Eupl05g00421 121 SUPERFAMILY Ribosomal protein L31e 12 93 IPR023621 -
Eupl05g00421 121 ProSitePatterns Ribosomal protein L31e signature. 55 69 IPR020052 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g00421 Eupl-Chr5 17590654 17594975 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g00421 7 121 Cytoplasmic Ribosomal Protein Gene Family AT4G26230 83.478 1.42e-68 200
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g00421 K02910 - psom:113308685 211.46