Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g00418 ATGAATCAAAAAATGTCTCAAAGAGATAAAGAAGAGACCGAATTCAAGGTTACTGAAACCCTAAAGGCTACCGCTGGAACCCTCAAGCCTCTTACGTTCGCCGGTCAAGAAAAGCCTAGATCCAGTTCGGTCCGGTCGCCAAAGAGATCCGATCCTCCGGCTGAGATTAGCCGGGATCTGACCCAGCAAAAGAAAGAGGAGGCTGAGGAGATGCCCACAATCGTTCGGAGGGAGGTAAATCGGTGCTCTGGTTGCCGGAGAAAGGTAGGATTGACCGGGTTCCGATGCCGGTGCGGGGATCTATTCTGTGCGGAGCATAGATATTCTGACCGACACGTATGCAGCTACGATTACATAGCTGCCGGTCGAGAGGTGATCGCTCGGGAAAATCCGGTTGTTAGAGCGGCGAAGATCGCTAGAGTCTGA 426 0.5211 MNQKMSQRDKEETEFKVTETLKATAGTLKPLTFAGQEKPRSSSVRSPKRSDPPAEISRDLTQQKKEEAEEMPTIVRREVNRCSGCRRKVGLTGFRCRCGDLFCAEHRYSDRHVCSYDYIAAGREVIARENPVVRAAKIARV* 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g00418 141 Gene3D - 55 137 IPR035896 -
Eupl05g00418 141 MobiDBLite consensus disorder prediction 51 72 - -
Eupl05g00418 141 SMART AN1_Zf_4 82 119 IPR000058 GO:0008270
Eupl05g00418 141 FunFam Zinc finger AN1-type containing 6 55 137 - -
Eupl05g00418 141 MobiDBLite consensus disorder prediction 1 18 - -
Eupl05g00418 141 Pfam AN1-like Zinc finger 82 118 IPR000058 GO:0008270
Eupl05g00418 141 SUPERFAMILY AN1-like Zinc finger 66 135 IPR035896 -
Eupl05g00418 141 ProSiteProfiles Zinc finger AN1-type profile. 76 122 IPR000058 GO:0008270
Eupl05g00418 141 PANTHER AN1-TYPE ZINC FINGER PROTEIN 33 140 - -
Eupl05g00418 141 MobiDBLite consensus disorder prediction 1 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g00418 Eupl-Chr5 17436586 17437718 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g00418 80 141 C2H2 Transcription Factor Family AT3G52800 59.677 3.14e-25 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g00418 - - nnu:104597437 191.43