Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g00415 ATGGAGACGAAGACCCCGGAGCTGAACCTCGACAAGCTGACCGCGATTAGGGTCCTGGGCAAAGGAGCCATGGGCACCGTCTTCTTGGTCACCGATCGGGTATCCGATCCATCTGCCCAATGCCCGTTCGCCCTCAAGGTTGTCGAGAAATTGATCTTCAACACCAAATTCGACGCTGATCGACGTGCCCGTTGGGAGGTGTCTGTCCTTTCCCGTCTCAGCCACCCCCTCCTCCCTACCCTCCTGGGCACTCTAGAAACGGAAGAGTTCATAGCTTGGGCTGTACCGTACTGCCCGGGCGGCGATCTTAACGTCCTCCGTTACCGTCAGACAGACCGTATCTTCTCCCCCACCGCCATACGCTTCTACGTCGCCGAAATCGTATGCGCTCTCGAGTATTTACACAATATGGGTATCGTATATCGTGACCTCAAACCCGAAAACGTACTCATACAACAATCCGGCCATATCACCCTTACCGACTTCGACCTCTCCCGGAATCTGACACCCAGAACGCCGAAACCCATGAACATGCCCGAACCCCGCGAGTTGGAGGTGGTGGAGGGTAGAAGGAAGCACCGTCGGAAACTGACGCGACTCATATCGGTAGTCTCGGAGAAAGGCTTAAAGAAAGCGAAATCCGCTCGTGTTTCACCAGTGAGTCGCCGGAGAACGAGTTTCTCTACAGGAGAACGATCCAACTCGTTCGTGGGTACCGAGGAGTACGTGTCGCCGGAGGTTGTACGTGCTGACGGTCACGAATTCGCCGTTGATTGGTGGGCTCTCGGGATATTAACGTACGAGATGATGTATGGGAAAACGCCGTTTCGCGGGAAGAATCGAAAAGAAACGTTCCGTAATGTTCTGATGAATCCCCCGCAGTTTATCGGTAAACGGACGGCTCTGACTGACTTGATCGAACGGTTGTTAGAGAAGGATCCAACAAAGCGTTTGGGGTATTACAGAGGTGCGGTGGAGATTAAAGAGCATGCATTCTTTCGTGGGCTAAGGTGGGATTTGTTAACGGAGGTGTCACGGCCGCCGTTCCTGACGTGTACAGAAGATACTCTAACGGAGACGCAGACGGGGAGTGGGAAGGACATAAAGGAATATTTTCGGAATCTAAGGTCGCAAACGTCAGTGCCGCCGTCAATGTTCCCATCGCCGTCATCTGACTACCGGACTAACGTGTCGTTAACGGAGTTCTAA 1209 0.5335 METKTPELNLDKLTAIRVLGKGAMGTVFLVTDRVSDPSAQCPFALKVVEKLIFNTKFDADRRARWEVSVLSRLSHPLLPTLLGTLETEEFIAWAVPYCPGGDLNVLRYRQTDRIFSPTAIRFYVAEIVCALEYLHNMGIVYRDLKPENVLIQQSGHITLTDFDLSRNLTPRTPKPMNMPEPRELEVVEGRRKHRRKLTRLISVVSEKGLKKAKSARVSPVSRRRTSFSTGERSNSFVGTEEYVSPEVVRADGHEFAVDWWALGILTYEMMYGKTPFRGKNRKETFRNVLMNPPQFIGKRTALTDLIERLLEKDPTKRLGYYRGAVEIKEHAFFRGLRWDLLTEVSRPPFLTCTEDTLTETQTGSGKDIKEYFRNLRSQTSVPPSMFPSPSSDYRTNVSLTEF* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g00415 402 SMART serkin_6 13 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl05g00415 402 Gene3D Phosphorylase Kinase; domain 1 13 101 - -
Eupl05g00415 402 ProSitePatterns Protein kinases ATP-binding region signature. 19 46 IPR017441 GO:0005524
Eupl05g00415 402 Gene3D Transferase(Phosphotransferase) domain 1 102 170 - -
Eupl05g00415 402 ProSitePatterns Serine/Threonine protein kinases active-site signature. 139 151 IPR008271 GO:0004672|GO:0006468
Eupl05g00415 402 Pfam Protein kinase domain 15 173 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl05g00415 402 Pfam Protein kinase domain 228 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl05g00415 402 ProSiteProfiles Protein kinase domain profile. 13 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl05g00415 402 SUPERFAMILY Protein kinase-like (PK-like) 10 390 IPR011009 -
Eupl05g00415 402 Gene3D Transferase(Phosphotransferase) domain 1 231 352 - -
Eupl05g00415 402 FunFam Serine/threonine-protein kinase OXI1 231 352 - -
Eupl05g00415 402 FunFam Serine/threonine-protein kinase OXI1 102 170 - -
Eupl05g00415 402 PANTHER FLIPPASE KINASE 1-RELATED 7 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g00415 Eupl-Chr5 17305623 17307152 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g00415 8 402 AGC Kinase Gene Family AT3G20830 60.149 4.65e-163 462
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Eupl05g00415 Pkinase 7.8e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g00415 - K08286 nnu:104597436 593.578