Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g00413 ATGGATCCCAGAAAATCGGTAGAAGATCAATTCTCCAAGTTGCATCCATTATTGTCCATAAGGACGAGAATTGCAATTGTAGGAGCTGGTCCAAGTGGCTTATCTTCTGCTTATGCACTGGCTAAGCTTGGTTACAGTAACATAACCGTTCTTGAGAAAAATCAAACAGTTGGAGGCATGTGTGAATCAGTGGAAATTGAAGAGACGGGGTCGGAACTGGAAGAAATGGATTCCCACAATTTCGCCCTCATCGACAGTTCTACAGGAAATTATCAGGAAATGAAAGTGGCAGATGATTATGTATCTGTGATGTCGCTGACCTTAAAACTCCAGGATGAGGCAAAGGACTTGAAACGAAATGGGATCCATGCCATGAGCGAAATTGCATCGGACCCAACTCCTAAATTTCTTGAGCTTCACGGGTTTAATTCTGTCCCCAAATCGGTGGCTTATGGGTACACTGCTTCAGGATATGGGTTTGTCCAGGACATGCCATATGCTTACATTCACGAATTCACCCGGACTTCTATGGCTGGAAAAATAAGGCGTTTTAAAGGAGGATACATGAGTGTTTGGCAGAAGATCAGCCAATCGCTGCCAATAGAAGTCCATTGCAGCACTGAAGTTTTGGCGATTAGACGCAATTCAGTTGGCATCAGCATAGATGTCAAAGATGCTAACGGAGAAACCAAAGTTCTGGAGTTTGATAAGATCATTATCTCGGGCGCTTTTCCTTTCAAGAACGGAAGAACATACAGATCACCTTCTCTAACTTCAGCAGAAATTGACTCTGAGGTAATGGATATGAGTGAGCTCGAAAAGGAGTTGTTCAGTAAAGTACAGACTATCGATTACTACACCACTGTTTTGAAGATTAAAGGACTGGAACATATACCAATGGGTTTTTATTACTTTGGGGAATTCATGGAGGATCCTGTGAGTATCGGTCATCCAGTGGCAATGCAGAGGTTCTACGCAGACACAGATATTTTCCTGTTCTGGTCTTATGGAAACTCAGAAGATATCAGAGGACCAAAGGTGACCGAGCTCGCAATTGATGCGGTGAAGAATATGGGAGCAAAAGTTGAGAAATTTGTTTTACAAAGGCGATTTAAGTATTTCCCCCATGTTAACAGCCAAGATATGAAGGTTGGGTTCTATGAGAAGTTGGAGTCTGAACTTCAAGGTCTGCAGAACACTTATTATGTAGGTGGGCTTATGGCGTTTGAGCTCACGGAGAGAAATTCATCTTATGCTATAGCTCTTGTCTGCAAGCACTTTGCAAATGACAGTGCTTTGCCGGCATTCCCATATGTTAAGAGATTGTTACCACTCTCAGATCATGGAGCCTGCAGCTCTAGAGAATTAGAAGATTGCTCGAGATTGGAATTTCCTGATCTGTCTTCCCTTGATGGCTATTTGAAGCACTGGGGGACTCATGGAGTCACCAAAGACAAAACTCTTTATACTTGGACCAATGAACAAGGGGAAGCAGTCTGCCAGAGGACGTATAGAGAACTTCATACCAATGCATCTCGTATTGCTCATAAGCTCTTGACAAGCTGTAAACCAGTTATCAATCCGGGTGACAGGGTTATTCTGGTCCATGTCCCAGGTCTGGACTTCATTGATGCTTTCTTCGGGTGCCTAAGAGCTAAAGTCTTACCAGTTCCAGTTCTTCCCCCTGATCCATTACAGAGAGGTGGGCAAGCACTTCTCAAGATCGAAAACATCACCAAATCATGCAATGCAGTAGCAATTCTATCTACCGTGGGTTACCATGCGGCTGTTCGGGCAGGCTCCGTGAAGAATATGATCTCATTAATGAAGAACAATGAAAAAAGTTGTGCTCGCTGGCCCAACCTTCCTTGGTTACACACAGACTCTTGGATCAAGAATTATAAAAACAAGCTTCCTGAAGATATATCTAATCAATCTGAACCTCATCCAGATGATCTGTGTTTTCTGCAATTCACATCAGGGTCAACAGGTGATGCTAAGGGGGTGATGATCACTCATGGTGGACTCATTCATAATGTGAAGTTGATGCAGAAGAGATACAAGAGCACATCAAGGACAGTACTAGTCAGCTGGCTTCCTCAGTACCATGATATGGGGTTAATCGGAGGAATTTTTACAGCATTGGTTAGCGGCGGATCCGCAATTCTTTTCTCCCCATTGACATTCATCAAGAACCCCCTCTTATGGCTTCAGACAATGAGCAAATACCAGGCCACTCACAGTGCTGGCCCCAACTTCGCTTTTGAACTCGTCGTCAGAAGATTAGAGTCTGATAAAGACAAAGCCCGGAACTATGACCTTTCTTCCATGGTTTTCCTCATGATTGCTGCTGAACCTGTGAGGCAGAAAACTCTTAAAAGGTTTGTCGAGCTCACTCGGCCTTTTGGTCTGTTTCAGGAGGTGATGGCTCCTGGTTATGGCTTGGCAGAGAATTGCGTGTTTGTAAGCTGTGCATTTGGAGAAGGGAATCCCATCTTGGTGGATTGGCAAGGGAGAGTCTGTTGTGGGTATGTGGATCCAAATGATCCGGATGTTGATATCAGAATTGTGGATCCAGAAACTGGTAGTGAGCATGGAGAATATGGAAAGGAGGGGGAAATCTGGATCAGTAGTCCAAGTGCTGGAATTGGGTATTGGGGCAGGCAAGAGCTGAGCCAAAAGACATTCAGAAATGAGCTTAAGAACCACCCCGGAAAAAGATTCACGAGAACTGGAGATCTGGGAAGAATTCTTGACAAAAAACTTTTTATCACTGGAAGAATAAAGGATCTTATCATTGTTGCCGGAAGAAACGTATACTCAGCCGATGTAGAAAAGACGGTTGAGAGCTCGTCTGAACTTTTACGCCCAGGTTGCTGTGCTGTTATTGGTGTTCCAGAGGAAATCTTATCAGCGAAAGGAATTTCGGTCCCGGAAAGTTCTGATCAGGTTGGCTTGGTTGTAATAGCAGAGGTTAGAGAAGGCAAACCTGTTGATAAGGAGGTCATTGAACAAATTCAAACCCGTGTGACAGAAGAACACGGTGTCCCTGTAGCCTCCATCAAGCTAATCAAGCCCAGAAGCATCTCTAAAACGACATCTGGAAAGATCAGGAGATTCGAGTGCCTCAAACAATTCACAGATGGGACACTGAGCTTAGTAACAGAACCAGGTTTGGCTAAAAGATCTCTGCTTCGGTCTTTCTCTACTGGAACTTGTATGGCAGGGAAAACGCCTCGACCTCAGCTTGCAAAAAGTCCTGTTTCTCCAAATGCCAAAATAAGCAAGAAAGAAATTACAGAGTTCTTAAAAAGACTGGTTTCAGAGCAAACAGGGATTTCAATTGAGAAAATCTCTGCCACTGAAAGCCTTGTATCGTATGGGATTGACTCAATTGGCGTGGTTAGAGCAGCTCAAAAGCTTTCAGATTTCATTGGAGTTCCAGTTGGGGCTGTAGATATTTTCACAGCAACCTGCATTGCAGACTTGGCAAGCTTCTCAGAGAATCTAGTTATGAAGTCTCAACCTCAATCCATGACTACTACATGTCTTCTAGAAAATGAGACAGATTATTTCAGATCATTGACTGAAATCTCAAGATTCCGGCAATTGGGTATTGGATTATTCCAACTTCTGGCTATTATTTATGCTTCTACTATGCTGATTCTTCCAGCATATATATCGGTCTCTGCTTTTCTGGTTTTACTCTCTGCTAATCTTTCACTGATAGGCAAATCTCCTTTGTTCAAATATCTGATTTGCTTGGCTTCGGCTCCTCTTGCTTGGATCCTTTGCATGTTCCTTACCTGCATTTGTATCTCCCTCTTTGGGAACTCATTCCTGCAACCAAATTATGCCCTTACTCCAGACATTTCCATATGGTCAACGGATTTTGTGAAATGGTGGGCACTTTACAAGGTCCAAGAAGTTGCTGGTAAAGTTCTGGCTGTCCATTTGAGAGGAACTATCTTCCTCAAATACTGGTTTGAGATTCTTGGAGCTAGGATAGGATCATCGGTTTTGCTTGACACCGTCAACATTACAGACCCTTCTCTGGTTTCAATTGGTGATGGAGCCGTGATTGCAGAAGGGGCTTTGATTCAAAGCCACGAGGTGAAGAATGGGATCTTAAGTTTCCTCCCAGTGAGAATTGGACAGAATTCTTCAATCGGTCCATATGCTGTAATCCAGAAAGGAAGTATTTTGGGAGATGAAGTTGAGATTCTGCCCTTGCAAAAGACTGAGGAAGGAAAACCTGTGCTTAGAACTGGGAAGGAAAATAAAATTCAAAAGGGTGAAATACTGCCTGAATTCACAGATAAAACACAGGAAAAACTCGAGGTGGTTTACCACTGTTTGGGCATCTACCTGGTTGGTTTCCTCAGTTCTCTCTCTGCAGCTATCCTTTACTGCCTCTACATTCAGTTATCTCAGAATCCTCCTTCCCTTCAACACTTTGTGTTTTTTTGCATATCTGGAGCCTTTCACTGGTTTCCAGCCACCATCATTGCATATGCCACCATGTTTGCCACAATCCCTTCAAATCCAGTTACTTTTGCTATCTCATTTGCCATTGCTTACCCAGCCCATGGCCTCATCCTCATTATCCTCACTGGCGCCTTGACCCGGTGCCTTGCTGGAAAACAAGAATCGCAACGAATCCACCTGAAAACTTGGCTTCGTCACAGAATTACCATTGCCTGCCACCTCAGATTCGCTCATCTCCTCTCTGGAACAGAAGCCTTCTGCATGTACTTACGCTATTTGGGCGCAAAAATTGGCCAGCATTGCTCCATCAGAGCTATCAACCCAGTCTCTGATCCAGAATTGATTTCAATTGGGGATGGCGTCCATTTGGGTGACTTCAGTCGGATCATTGCTGGGTTCTATTCCTACTGTGGTTTTGATTGCCAGAAAATTGAGGTACAGGACAACTCAGTAGTTGGTAGTCAGAGCCTCATCCTCCCTGGTTGCATCATTCAAAAAGACGTTATTCTTGGTGCTCTTTCAGTTGCTCCTGTGAATTCAGTTCTTAAAAGGGGTGGAATCTACATGGGGTCTCAGACCCCAATCATGGTCAAGAACACCATGCATGCTTTGGATGAGCGTATAGAAGAGATGGACATGAAATATAAGAAGGTAGTCGGTAATCTGGCAGGAAATTTGGCCGTCACTACGATGAAGGTAAAATCGAGGTACTTCCATCGAATTGGTGTCAGCGCGAAGGGCATTTTAAAAATGTTTGACAACTTACCAGGGTTGCCAGATCACAAGATCTTCTGTGCCGGAAAGAGTTTCCCTGTCATAATTCGGCACAGTAATAGCTTGAGTGCTGATGATGATGCAAGAATTGATGCGCGTGGCGCAGCAGTACGGATACTTAAAGAGGATCGCACTAATGATTCCCCGCTTCTCGATCTGACACTAAAGACAGGCAAAGCATTCTATGCTCGCACGATCGGTGACTTTGCAACATGGCTCGTTTGTGGACTTGCTGCAAGGGAGGAGCATGTGAAGCGGGTCCCTCATGTGCGGGATGCTGTGTGGGATTCACTCCGCCAGGCCAACTCATACGCCGAGTTGCATTACTATTCAAATGTGTGTCGGCTCTTCCGGTGCAATGATGGTCAGGAGATTTATGTGAAATTCAAGCTTCGGCCTTTTGATGACAATATTGGTGAAGATTCCGGAAAGGTGGAGCCAATGGGGATACTCCCTCCTGAAACTGGGGCAATCCCGAGGGACAAGAATGACACCCGCCCCCTACTCTTCCTCACTGATGACTTCCAACGCCGTGTCAACTCCCCTGGTGGAGTCCGCTACATCTTCCAACTGCAATTCCGGCCAGTTCCACATGGAGAAATTGACCGTGATACTGCACTTGACTGCACCCGGCCATGGGACCCGTCCGAGTTCCCATTTGTCGATGTGGGTGAGATCACAATTGATCAGAACCTCACAAGTGAAGACTCAGAGAAGCTGGAGTTTAATCCATTCCTCCGATGCCACGAGGTGGATGTCATCCGAGCTTCGTCATGCTCCCAGAGTGCATCCATAGACCATGGTCGTTCACTAATCTATGAGATATGCCAGCATTTGCGGAATGGGGAGCCACTTCCAGAGGCATGGCGGATTTTCTTAGAGCAATCTGATGTGAAAGTGGATCTTTCCGGCTGTCCAATGGCAATGGCGTTGACGAACAAAGACACGGGAAAAGTGACACTGGAAAGGACATGGTATCAGACCTTATGGGCCATGTTTTGTCAACCATTGCTACAAACGGTCCTGCCCTATTTCATATTGGGGTTGGTTGTCTTTGCACCTTTGAACTGGGTTTTTTACATGAAGAAGACCAACAAGCTCGCACTGCATTGGTTGCTGCCTTTGTTCTGGGTTTTTTCAGGTAGTTTGGCTGGATTGGTTTGTGTCGTGGCCAAGTGGGCTTTAGTGGGAAGGAGGAGAGAAGGTGAAACATTATTTATTTGGAGTAAAGAGGTCTTCATGGACACTATATGGCAGGCTTTGAGGACCTTGGTAGGGGACTATTTCATGGAAATGACAAGTGGGTCTGTATTTTTTGGGCTCTGGATGAGGCTGATGGGATCAGATATAGACTTGGACCATGGTATCTATGTGGATAGCATGGGTGCTGTTTTGAATCCAGAAATGGTGGAGATTGAAAGAGGTGGGTGTGTTGGGAGAGAAGCAGTGCTTTTTGGGCACATATATGAAGGTGAAGGAGGGAAGGTGAAGTTTGGGAAAATTAGAGTGGGGGAAGGTGGGTTTGTGGGGAGTAGAGCTGTAGTTATGCCTGGAGTGAGAGTGGAGAGTGGTGGTAACCTTAATGCTCTCTCACTTGCAATGAAGGAAGAGATTGTCAGATCAAAGTGA 6891 0.4494 MDPRKSVEDQFSKLHPLLSIRTRIAIVGAGPSGLSSAYALAKLGYSNITVLEKNQTVGGMCESVEIEETGSELEEMDSHNFALIDSSTGNYQEMKVADDYVSVMSLTLKLQDEAKDLKRNGIHAMSEIASDPTPKFLELHGFNSVPKSVAYGYTASGYGFVQDMPYAYIHEFTRTSMAGKIRRFKGGYMSVWQKISQSLPIEVHCSTEVLAIRRNSVGISIDVKDANGETKVLEFDKIIISGAFPFKNGRTYRSPSLTSAEIDSEVMDMSELEKELFSKVQTIDYYTTVLKIKGLEHIPMGFYYFGEFMEDPVSIGHPVAMQRFYADTDIFLFWSYGNSEDIRGPKVTELAIDAVKNMGAKVEKFVLQRRFKYFPHVNSQDMKVGFYEKLESELQGLQNTYYVGGLMAFELTERNSSYAIALVCKHFANDSALPAFPYVKRLLPLSDHGACSSRELEDCSRLEFPDLSSLDGYLKHWGTHGVTKDKTLYTWTNEQGEAVCQRTYRELHTNASRIAHKLLTSCKPVINPGDRVILVHVPGLDFIDAFFGCLRAKVLPVPVLPPDPLQRGGQALLKIENITKSCNAVAILSTVGYHAAVRAGSVKNMISLMKNNEKSCARWPNLPWLHTDSWIKNYKNKLPEDISNQSEPHPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMQKRYKSTSRTVLVSWLPQYHDMGLIGGIFTALVSGGSAILFSPLTFIKNPLLWLQTMSKYQATHSAGPNFAFELVVRRLESDKDKARNYDLSSMVFLMIAAEPVRQKTLKRFVELTRPFGLFQEVMAPGYGLAENCVFVSCAFGEGNPILVDWQGRVCCGYVDPNDPDVDIRIVDPETGSEHGEYGKEGEIWISSPSAGIGYWGRQELSQKTFRNELKNHPGKRFTRTGDLGRILDKKLFITGRIKDLIIVAGRNVYSADVEKTVESSSELLRPGCCAVIGVPEEILSAKGISVPESSDQVGLVVIAEVREGKPVDKEVIEQIQTRVTEEHGVPVASIKLIKPRSISKTTSGKIRRFECLKQFTDGTLSLVTEPGLAKRSLLRSFSTGTCMAGKTPRPQLAKSPVSPNAKISKKEITEFLKRLVSEQTGISIEKISATESLVSYGIDSIGVVRAAQKLSDFIGVPVGAVDIFTATCIADLASFSENLVMKSQPQSMTTTCLLENETDYFRSLTEISRFRQLGIGLFQLLAIIYASTMLILPAYISVSAFLVLLSANLSLIGKSPLFKYLICLASAPLAWILCMFLTCICISLFGNSFLQPNYALTPDISIWSTDFVKWWALYKVQEVAGKVLAVHLRGTIFLKYWFEILGARIGSSVLLDTVNITDPSLVSIGDGAVIAEGALIQSHEVKNGILSFLPVRIGQNSSIGPYAVIQKGSILGDEVEILPLQKTEEGKPVLRTGKENKIQKGEILPEFTDKTQEKLEVVYHCLGIYLVGFLSSLSAAILYCLYIQLSQNPPSLQHFVFFCISGAFHWFPATIIAYATMFATIPSNPVTFAISFAIAYPAHGLILIILTGALTRCLAGKQESQRIHLKTWLRHRITIACHLRFAHLLSGTEAFCMYLRYLGAKIGQHCSIRAINPVSDPELISIGDGVHLGDFSRIIAGFYSYCGFDCQKIEVQDNSVVGSQSLILPGCIIQKDVILGALSVAPVNSVLKRGGIYMGSQTPIMVKNTMHALDERIEEMDMKYKKVVGNLAGNLAVTTMKVKSRYFHRIGVSAKGILKMFDNLPGLPDHKIFCAGKSFPVIIRHSNSLSADDDARIDARGAAVRILKEDRTNDSPLLDLTLKTGKAFYARTIGDFATWLVCGLAAREEHVKRVPHVRDAVWDSLRQANSYAELHYYSNVCRLFRCNDGQEIYVKFKLRPFDDNIGEDSGKVEPMGILPPETGAIPRDKNDTRPLLFLTDDFQRRVNSPGGVRYIFQLQFRPVPHGEIDRDTALDCTRPWDPSEFPFVDVGEITIDQNLTSEDSEKLEFNPFLRCHEVDVIRASSCSQSASIDHGRSLIYEICQHLRNGEPLPEAWRIFLEQSDVKVDLSGCPMAMALTNKDTGKVTLERTWYQTLWAMFCQPLLQTVLPYFILGLVVFAPLNWVFYMKKTNKLALHWLLPLFWVFSGSLAGLVCVVAKWALVGRRREGETLFIWSKEVFMDTIWQALRTLVGDYFMEMTSGSVFFGLWMRLMGSDIDLDHGIYVDSMGAVLNPEMVEIERGGCVGREAVLFGHIYEGEGGKVKFGKIRVGEGGFVGSRAVVMPGVRVESGGNLNALSLAMKEEIVRSK* 2297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g00413 2296 SUPERFAMILY Trimeric LpxA-like enzymes 2147 2289 IPR011004 -
Eupl05g00413 2296 Gene3D - 69 423 IPR036188 -
Eupl05g00413 2296 Gene3D - 280 373 - -
Eupl05g00413 2296 ProSiteProfiles Carrier protein (CP) domain profile. 1097 1171 IPR009081 -
Eupl05g00413 2296 Gene3D - 70 178 - -
Eupl05g00413 2296 ProSitePatterns Putative AMP-binding domain signature. 656 667 IPR020845 -
Eupl05g00413 2296 Pfam NAD(P)-binding Rossmann-like domain 26 81 - -
Eupl05g00413 2296 ProSitePatterns Phosphopantetheine attachment site. 1126 1141 IPR006162 -
Eupl05g00413 2296 Gene3D - 18 68 IPR036188 -
Eupl05g00413 2296 SUPERFAMILY Heme-dependent catalase-like 1664 2037 IPR020835 GO:0020037
Eupl05g00413 2296 SUPERFAMILY ACP-like 1095 1171 IPR036736 -
Eupl05g00413 2296 CDD FAAL 485 1048 IPR040097 GO:0008610
Eupl05g00413 2296 Gene3D - 1087 1169 IPR036736 -
Eupl05g00413 2296 Pfam Phosphopantetheine attachment site 1102 1165 IPR009081 -
Eupl05g00413 2296 PANTHER DISCO-INTERACTING PROTEIN 2 DIP2 -RELATED 107 2054 - -
Eupl05g00413 2296 SUPERFAMILY Acetyl-CoA synthetase-like 479 1063 - -
Eupl05g00413 2296 Gene3D Hexapeptide repeat proteins 1551 1695 - -
Eupl05g00413 2296 Gene3D Catalase core domain 1696 2043 - -
Eupl05g00413 2296 Gene3D - 454 928 IPR042099 -
Eupl05g00413 2296 SUPERFAMILY FAD/NAD(P)-binding domain 22 246 IPR036188 -
Eupl05g00413 2296 Gene3D - 929 1057 IPR045851 -
Eupl05g00413 2296 Gene3D Hexapeptide repeat proteins 1330 1425 - -
Eupl05g00413 2296 SUPERFAMILY Trimeric LpxA-like enzymes 1581 1687 IPR011004 -
Eupl05g00413 2296 SUPERFAMILY Trimeric LpxA-like enzymes 1320 1408 IPR011004 -
Eupl05g00413 2296 Pfam AMP-binding enzyme 484 934 IPR000873 -
Eupl05g00413 2296 PRINTS Adrenodoxin reductase family signature 47 60 - -
Eupl05g00413 2296 PRINTS Adrenodoxin reductase family signature 23 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g00413 Eupl-Chr5 17236967 17244561 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g00413 639 967 Monolignol Biosynthesis Gene Families AT1G20480 27.273 4.17e-23 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g00413 - - vvi:100253550 3536.5