Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g00395 ATGGACTACGGGCTTTCAGATAGCAGCGCTCCATTTATGGCGGATGAAACTAAAGCAGAAGAAGAGGAAGATTACATGGGAGATCTCTCTCTGTTTCTTCCTCCTGAAACCTCCCAGCCTTCTAAAATTCCTCTAAAAAAGAGTTCTAACACTAAAACCCTAACTCATCAACCCTCGAAGAAGAAACCCGAAGCCTTGAACTGGCAAGAACGACGTAGAATCGATCGAGAATGGAAGCAGCGTGAAGAGGACGAGCAAACCCTAGCGAACATGGAGTCCGCGATTCCGCAATCGAACATCGGATTCAAGCTGTTGAAGCAAATGGGCTACAGTCCCGGTTCGGCATTGGGCAAGGACCGGTCTGGTCTTGCCGAACCGGTTGGGCTTCAGATACGGCGGTCACGGGCCGGGATTGGTAGGGAAGACCCTGTGAAGGAGAAGTTGAAGAGAGACGAATTTAGAGCAGAGAAGAAGAGGAAGATGGAGGAGGATTTAATGGCGGAATTCGGTTGCAGGCAGAAGTCGCAATGGCGGAGCCGTCATGTTGTTGATAATTTTAATAAGGCAAAAGTGGTGCTTGACCAATTGGAGAATAAGGACGTTATTGAGCCGGAGAAGAACGATGACGAAGAAGATGAATTGGAACAGGAGGAGGAGGACGAAGAAGAAGAGAAGATAACAGAAGAGGATTTACAGGATATATTAATGAAGCTGAGAGATGAACATCGCTATTGCCTCTTCTGCGGATGCCAGGTGAGCCGCTCATTCAGACTTTTACTTACGAATCAGTGGAGGCACTGTTATCCAACTGTCCTGGAACCGATGAAGATGACCACTGAACCAGTATTTTCCAGAGGGTCCACTTGCATAGTCCAAACAGTGAGAAATTCGGTCTCAATCACAAGATGGAGGATAGTTACGTCAGGAGTCTGA 933 0.4748 MDYGLSDSSAPFMADETKAEEEEDYMGDLSLFLPPETSQPSKIPLKKSSNTKTLTHQPSKKKPEALNWQERRRIDREWKQREEDEQTLANMESAIPQSNIGFKLLKQMGYSPGSALGKDRSGLAEPVGLQIRRSRAGIGREDPVKEKLKRDEFRAEKKRKMEEDLMAEFGCRQKSQWRSRHVVDNFNKAKVVLDQLENKDVIEPEKNDDEEDELEQEEEDEEEEKITEEDLQDILMKLRDEHRYCLFCGCQVSRSFRLLLTNQWRHCYPTVLEPMKMTTEPVFSRGSTCIVQTVRNSVSITRWRIVTSGV* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g00395 310 MobiDBLite consensus disorder prediction 199 227 - -
Eupl05g00395 310 MobiDBLite consensus disorder prediction 57 88 - -
Eupl05g00395 310 Pfam Domain of unknown function (DUF4187) 217 252 IPR025239 -
Eupl05g00395 310 Coils Coil 207 234 - -
Eupl05g00395 310 PANTHER UNCHARACTERIZED 20 253 IPR039249 -
Eupl05g00395 310 MobiDBLite consensus disorder prediction 34 56 - -
Eupl05g00395 310 SMART G-patch_5 95 141 IPR000467 GO:0003676
Eupl05g00395 310 SMART DUF4187_2 216 266 IPR025239 -
Eupl05g00395 310 MobiDBLite consensus disorder prediction 1 92 - -
Eupl05g00395 310 Pfam G-patch domain 97 140 IPR000467 GO:0003676
Eupl05g00395 310 ProSiteProfiles G-patch domain profile. 97 143 IPR000467 GO:0003676
Eupl05g00395 310 MobiDBLite consensus disorder prediction 204 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g00395 Eupl-Chr5 15909709 15928648 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g00395 89 142 C2H2 Transcription Factor Family AT5G26610 40.741 1.21e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g00395 - - nnu:104597532 315.079