Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g00394 ATGGAGTCTGCGATTCCGCAATCGAACATCGGATTCAAGATGTTGAAGCAAATGGGCTACAGTCCCGGTTCGGCATTGGGCAAGGACCGGTCTGGTCGGGCCGAACCAGTTGGGCTTCAGATACGGCGGTCACGGGTCGGGATAGGTAGGGAAGACCCTGTGAAGGAGAAGTTGAGGAGAGACGAATTTAGAGCAGAGAAGAAGAGGAAGATGGAGGAGGATTTAATGGCGGAATTCGGTTGCAGGCAGAAGTTGCAATGGCGGAGCCGTTATGTTGTTGATAATTTTAATAAGGCAAAAGCGGTGCTTGACCAATTGGAGAATAAGGAGGTTATTGAGCCGGAGAAGAATGATGACGAAGAAGATGAATTGGAACAGGAGGAGGAGGACGAAGAAGAAGAGAAGATAATAGAAGAGGAACATAATGATTGGTTAGAAAGACTTATGGAAGAAGAAATTTTGGTTGCTCTTAAGGATCTTAGCTGTGATGGAGCTTTTGCTCCAGATGGATTCTCACTAGCCTTCTTTAAGAATGGTTGGGATATCGTAGGAGGGGATTTCTTGCTAGTAGTAAAGGAGTTGGTGGAGGAAAATAGGCTTGATCGAGCTCCAATAGTACTTTCATCATGCTCATCCCAAGGAAGAGTCCTTGAGAGATTTTTGCCCATTAGCTTAGTTGGGAGTACTTACAAAATTATTTCCAAGGTGTTAGCATCCAAGATGAAAGAGGTGTTGGGCTCGATTATTTTCTCGTACCAAGGCGCGTTTGTGAAGGGTAGACAGATTTGA 789 0.4525 MESAIPQSNIGFKMLKQMGYSPGSALGKDRSGRAEPVGLQIRRSRVGIGREDPVKEKLRRDEFRAEKKRKMEEDLMAEFGCRQKLQWRSRYVVDNFNKAKAVLDQLENKEVIEPEKNDDEEDELEQEEEDEEEEKIIEEEHNDWLERLMEEEILVALKDLSCDGAFAPDGFSLAFFKNGWDIVGGDFLLVVKELVEENRLDRAPIVLSSCSSQGRVLERFLPISLVGSTYKIISKVLASKMKEVLGSIIFSYQGAFVKGRQI* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g00394 262 Coils Coil 117 141 - -
Eupl05g00394 262 ProSiteProfiles G-patch domain profile. 7 53 IPR000467 GO:0003676
Eupl05g00394 262 MobiDBLite consensus disorder prediction 114 135 - -
Eupl05g00394 262 Pfam G-patch domain 7 50 IPR000467 GO:0003676
Eupl05g00394 262 SMART G-patch_5 5 51 IPR000467 GO:0003676
Eupl05g00394 262 PANTHER UNCHARACTERIZED 2 146 IPR039249 -
Eupl05g00394 262 MobiDBLite consensus disorder prediction 110 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g00394 Eupl-Chr5 15888162 15892013 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g00394 5 52 C2H2 Transcription Factor Family AT5G26610 41.667 8.74e-06 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g00394 - - vvi:100246967 174.866