Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g00384 ATGTTTTCGTGGCTGGCAAGGATTGCAGCGGCGTGCTTGCGACCGGTCCGGAGATACGCCCGTATGAACAAGGATGATGAGGACGGAGGAGGGGACGACGCGCTACTCTGGTGCCGAGACCTCGACCGCCATTCCTTGGGTGACTTCTCCATCGCGGTCGTCCAAGCTAACGAGATCCTCGAGGATCACAGCCAAGTTGAGACCGGTCCCCACGCGACCTTCGTTGGTGTTTACGATGGCCATGGTGGTCCGGAGGCTTCCCGTTTCGTCTGTGATCAACTCTTTCTTCATCTTATCAGGCTTGCTCGAGAAAATGGAACTATATCTGAAGATGTTCTTAGGAATGCTTTTTCTGCAACAGAGGATGGATTTCTCGCTCATGTGCGTAGAACACGTGGAATAAAACCGTTAATCGCTGCCATGGGATCTTGTTGTTTGGTTGGAGTTATCTGGAGAGGAATGTTGTATGTTGCCAACTTGGGTGATTCTCGAGCTATAATAGGTTGTTTAGGTAGGTCAAATTGCATTGTTGCAGAGCAGTTGACTAGGGATCATAATGCGAGTATGGAGGAGGTTAGACAAGAACTGAGGTCCCTACACCCAGATGATTCACATATTGTACTTTTAAAGCGCGGGGTATGGCGTGTCAAAGGCATCATTCAGGTTTCTAGATCTATAGGGGATGCATACTTGAAGAAGCCAGAGTTTTCTCTCGATCCATCATTTTCACGTTTCCACCTCACAGAACCCCTTCGCCGACCTGTCCTAACAGCAGAACCATCAGTATATACAAGAGTAATACGGCCGGAAGATAAATTTCTGATATTTGCTTCTGATGGGCTTTGGGAACACATGACAAACCAGGAAGCGGTTGAGATTGTGTATAATTACCCACGAGCAGGTATAGCAAGAAGACTCATTAAAACAGCTTTAAATGAGGCAGCTAGGAAAAGAGAAATGAGTTATGATGGCCTTAAGAAGGTTGAAAAGGGTGTCCGGCGGTTCTTCCATGATGATATTACAGTTGTTGTTATCTTCATAGACCATGATCGGCTGGGAGAAAAGACAGCTGTACCAGGACTGTCAGTTCGAGGGTTCATTGACACAGTTGGACCGTCCGATTTTTCTATTTTGGAGGGGTTCGATGTGAATCCAAATTCTATGTAG 1167 0.4687 MFSWLARIAAACLRPVRRYARMNKDDEDGGGDDALLWCRDLDRHSLGDFSIAVVQANEILEDHSQVETGPHATFVGVYDGHGGPEASRFVCDQLFLHLIRLARENGTISEDVLRNAFSATEDGFLAHVRRTRGIKPLIAAMGSCCLVGVIWRGMLYVANLGDSRAIIGCLGRSNCIVAEQLTRDHNASMEEVRQELRSLHPDDSHIVLLKRGVWRVKGIIQVSRSIGDAYLKKPEFSLDPSFSRFHLTEPLRRPVLTAEPSVYTRVIRPEDKFLIFASDGLWEHMTNQEAVEIVYNYPRAGIARRLIKTALNEAARKREMSYDGLKKVEKGVRRFFHDDITVVVIFIDHDRLGEKTAVPGLSVRGFIDTVGPSDFSILEGFDVNPNSM* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g00384 388 FunFam Probable protein phosphatase 2C 42 39 355 - -
Eupl05g00384 388 ProSitePatterns PPM-type phosphatase domain signature. 74 82 IPR000222 GO:0043169
Eupl05g00384 388 SMART PP2C_4 28 345 IPR001932 -
Eupl05g00384 388 SUPERFAMILY PP2C-like 55 348 IPR036457 -
Eupl05g00384 388 Gene3D - 37 356 IPR036457 -
Eupl05g00384 388 PANTHER PROTEIN PHOSPHATASE 46 345 IPR015655 GO:0004722|GO:0006470
Eupl05g00384 388 ProSiteProfiles PPM-type phosphatase domain profile. 48 347 IPR001932 -
Eupl05g00384 388 Pfam Protein phosphatase 2C 67 315 IPR001932 -
Eupl05g00384 388 CDD PP2Cc 55 347 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g00384 Eupl-Chr5 15375961 15389046 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g00384 1 378 PP2C-type Phosphatase Gene Family AT5G06750 71.611 0.0 560
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g00384 K01102 - ming:122068578 648.662