Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g00358 ATGGATGGCAGCAAATTTTTGGTAACTATAAACCGGAGAGAGGTGGTGGTCGTGACGTTGCCGATGCACGAGCACTGGCTACCCCATTCCAACCTAGATCTAGTCCTGCTGCCAGTAGAGTTTAGTGTTTTCTTCTGTTACACGAAGCCTAACAGGCACACCAACTTGACCTTCACATCCATGGTTAGTGTCCTCAAGAAAGCCATGGCTCAAGCTCTCGTGCCTTACTATGTGTTTGGCGGCGAAATTGTACTGAACTCTATAGGCGAACCGGAACTGCTGTGCAACAATCGAGGGGTTGAATTCATTGAAGCTTATGCTGATGTAGAACTCAAAGATCTCCAGCTGTACAATCCAGACGCCAGTGTAGAGGGGAAGCTAGTACCCAAGAAGAAGGAAAGCGTACTCTGCGTTCAAGTGAGATATCTTTCTCTATTACTTGATATTATTGGAAAATATATGGAAATTGGAGAATTTATTTGA 483 0.4472 MDGSKFLVTINRREVVVVTLPMHEHWLPHSNLDLVLLPVEFSVFFCYTKPNRHTNLTFTSMVSVLKKAMAQALVPYYVFGGEIVLNSIGEPELLCNNRGVEFIEAYADVELKDLQLYNPDASVEGKLVPKKKESVLCVQVRYLSLLLDIIGKYMEIGEFI* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g00358 160 Pfam Transferase family 8 141 - -
Eupl05g00358 160 PANTHER ACYL TRANSFERASE 4 8 140 - -
Eupl05g00358 160 Gene3D - 5 146 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g00358 Eupl-Chr5 12547774 12548256 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g00358 10 135 Monolignol Biosynthesis Gene Families AT5G48930 28.462 2.21e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g00358 - - csin:114281282 197.978