Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g00348 ATGCCTGAGCTTCGTAGCGGAGTACGTCGTGGCCGTGCTCCGATTGTAGATCAGCGGCGTAAGCCGGGAGGTCGAGGAGGCACGGAGAAATCAGATCCGTTGGTCGGTAATTACATCCGAACTAGAGCTGCGGCAGCGAGAATTGAGGTTAAGAAGGCTCCTGCAGTTAGGCCGAGAACAAGGAATCGGGCCAAGGCTGCCGTGATTGTGATTTCTGAGAAGAACGGTGAAGAAGAAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGAAGGGGTTCGGGTTGAGAGTCCCCAGAAAGAAACGATGGGTGACGATAGCGATGGTTTGAGCGCTAATAAGGTCGTTGGGCAGGAAGAAGAAGGGAGCACCGCTCCTTTCCCGGAAAGGGTTCAGGTTGGAGGATCACCTGTCTATAAGATTGAAAGGAAGTTGGGCAAAGGTGGGTTTGGTCAGGTTTTTGTTGGTCGTCGTGTTTCAGGAGGGAATGAACGGCCAACAGGTCCTGGGGCTACAGAGGTGGCTTTAAAATTTGAGCATAGAAGCAGCAAAGGCTGTAACTATGGTCCTCCATATGAGTGGCAAGTTTACAACACTCTTGGTGGCAGTCATGGAGTGCCTAGAGTACACTATAAAGGGAGGCAAGGTGACTACTATGTAATGGTCATGGATATGTTAGGCCCTAGTTTATGGGATGCATGGAATTCTTCAGGGCAAGCGATGTCCTCAGAAATGGTAGCTTGTATTGCTGTTGAATCCATATCAATCCTAGAGAAGATGCACTCGAGGGGTTATGTCCATGGAGATGTAAAGCCTGAGAATTTCCTTCTTGGTCAGCCAGCTACTCCACAAGAGAAGAAATTGTTTCTTGTTGACCTCGGTTTAGCTACAAAATGGAGAGATGGTGCTAGTGGCCAGCATGTTGAATATGATCAACGTCCTGATGTCTTCAGGGGAACTGTTCGATATGCTAGTGTTCATGCCCACTTGGGAAGAACCGCAAGTAGAAGAGATGATCTAGAATCTCTCGCATATACACTCATCTTTCTTCATCGAGGCAGGTTACCATGGCAGGGTTATCAGGGCGACAACAAATCGTTCCTAGTTTGCAAGAAAAAGATGGCAACATCTCCTGAGATGCTATGTTGCTTTTGCCCTCCACCTTTTAAGCAATTTCTTGAGATAGTGGTGAACATGAAATTTGATGAGGAGCCTAACTATTCCAAGCTAATATCTTTGTTTGAGGGCTTGATTGGACCCAATCCAGCTATAAGGCCAATTAATACTGATGGTGCTCAGAAGATTATCCATCAAGTTGGCCAAAAACGGGGTAGATTGACCATTGAGGAAGAAGAGGATGGTCAACCAAGGAAGAAGGTCCGTTTAGGAGTTCCTGCTACCCAGTGGATTTCAGTTTACAATGCCAGGCTACCAATGAAACAGAGGTACCATTATAATGTGGCGGATGGGCGATTGTCGCAACATGTGGAAAGAGGAAATGAAGATGGACTGCTTATAAGTTGTGTGGCATCTTGTTCCAATCTTTGGGCCCTGATTATGGATGCTGGAACTGGTTTCAATTCTCAAGTTTATGAACTGTCACCATGCTTTCTCCACAAGGAATGGATCATGGAGCAATGGGAGAAGAACTATTACATAAGTTCTATTGCCGGTGCTAATAATGGAAGCTCTCTCGTGGTGATGTCTAAAGGCACCCAATATACGCAACAATCTTACAAGGTCAGCGATTCTTTCCCCTTCAAGTGGATAAACAAGAAGTGGAGAGAAGGATTTCATGTGACCTCCATGGCAACTGCTGGAAGCCGTTGGGGTGTTGTCATGTCTCGCAATGCGGGCTTCAGTGATCAGGTTGTTGAGCTTGATTTTCTCTATCCAAGTGAGGGCATCCACAGACGTTGGGATAGCGGTTATCGCATAACATCTACAGCTGCTACTTGGGATCAAACCGCTCTTATTTTGAGTGTGCCGAAGCGCAAACCTGGGGATGAAACTCAGGAGACCTTGCGCACGTCCGCATTTCCAAGTTCTCATGTCAAGGAGAAATGGGCAAAGAATCTCTATCTTGCTTCAGTGTGTTACGGACGCACTGTATCTTGA 2118 0.4707 MPELRSGVRRGRAPIVDQRRKPGGRGGTEKSDPLVGNYIRTRAAAARIEVKKAPAVRPRTRNRAKAAVIVISEKNGEEEGGGGGGGGGGGEGVRVESPQKETMGDDSDGLSANKVVGQEEEGSTAPFPERVQVGGSPVYKIERKLGKGGFGQVFVGRRVSGGNERPTGPGATEVALKFEHRSSKGCNYGPPYEWQVYNTLGGSHGVPRVHYKGRQGDYYVMVMDMLGPSLWDAWNSSGQAMSSEMVACIAVESISILEKMHSRGYVHGDVKPENFLLGQPATPQEKKLFLVDLGLATKWRDGASGQHVEYDQRPDVFRGTVRYASVHAHLGRTASRRDDLESLAYTLIFLHRGRLPWQGYQGDNKSFLVCKKKMATSPEMLCCFCPPPFKQFLEIVVNMKFDEEPNYSKLISLFEGLIGPNPAIRPINTDGAQKIIHQVGQKRGRLTIEEEEDGQPRKKVRLGVPATQWISVYNARLPMKQRYHYNVADGRLSQHVERGNEDGLLISCVASCSNLWALIMDAGTGFNSQVYELSPCFLHKEWIMEQWEKNYYISSIAGANNGSSLVVMSKGTQYTQQSYKVSDSFPFKWINKKWREGFHVTSMATAGSRWGVVMSRNAGFSDQVVELDFLYPSEGIHRRWDSGYRITSTAATWDQTALILSVPKRKPGDETQETLRTSAFPSSHVKEKWAKNLYLASVCYGRTVS* 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g00348 705 ProSitePatterns Serine/Threonine protein kinases active-site signature. 265 277 IPR008271 GO:0004672|GO:0006468
Eupl05g00348 705 ProSiteProfiles Protein kinase domain profile. 139 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl05g00348 705 MobiDBLite consensus disorder prediction 1 27 - -
Eupl05g00348 705 CDD STKc_CK1 139 414 - -
Eupl05g00348 705 SUPERFAMILY Protein kinase-like (PK-like) 139 424 IPR011009 -
Eupl05g00348 705 MobiDBLite consensus disorder prediction 1 36 - -
Eupl05g00348 705 FunFam casein kinase 1-like protein HD16 112 461 - -
Eupl05g00348 705 ProSitePatterns Protein kinases ATP-binding region signature. 145 177 IPR017441 GO:0005524
Eupl05g00348 705 PANTHER CASEIN KINASE-RELATED 139 669 - -
Eupl05g00348 705 SMART serkin_6 139 436 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl05g00348 705 Gene3D Transferase(Phosphotransferase) domain 1 114 458 - -
Eupl05g00348 705 Pfam Protein kinase domain 139 426 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl05g00348 705 MobiDBLite consensus disorder prediction 71 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g00348 Eupl-Chr5 10514364 10553390 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g00348 90 308 EF-hand Containing Proteins AT4G36070 26.383 5.27e-08 54.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Eupl05g00348 Pkinase 1.8e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g00348 - - nnu:104597586 1281.93