Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g00333 ATGGATAAGAACGAAAGAGAGACTCACGACTTCATGAATGTAGACTCTTTCTCTCAATTGCCTTTTATACGTCCGTCGCCTGTTAGAGAGAAAGGCATTCGACTCTTTGGTATCGAATTCGGAAGAGACGATGCTATTACCGATGAGTCCGAGTCAGGTACCACTAACGTGAGTGACGATGCGAAGGATAACGAGAATGGTCATGAGAGTGGTCGCAAATTCGAGTGCCATTACTGCTGTCGAAATTTCCCAACATCTCAAGCTTTGGGGGGTCACCAAAACGCCCACAAGCGTGAACGTCAGCACGCTAAACGTGCGCACCTCCAGTCTGTGATGGCACACAACAGCATCACCGACGGACACATGTACGGACTCATGAATTACCGACTCGGCTCCACGCCTATGCCGACGCTTACTTATCCTTCTTGGAACGACAGCAGCAACACCACTATTATTAGTCAGAACCGGTTTTATGGAAACCATGATTCCTTTTCTCAAAGGCCCCTTAATGGGAGCCCTTTGGCTATGTGGAGAATCCCAGCTGTTCAAAGCAACCAAAGTTTTAACGGGGATCGTTCGTTGATGCCGTCACCGTTGTTTCAAGGCGATAATTTGAAATCGGCGATGATCACCGGATCTAGTTCTCAGAGTCGACATGTGTACGAACTGAAGGGGAAGGTACAAGATAATGTGAGTTTGGATCTGCATCTGTAA 714 0.4748 MDKNERETHDFMNVDSFSQLPFIRPSPVREKGIRLFGIEFGRDDAITDESESGTTNVSDDAKDNENGHESGRKFECHYCCRNFPTSQALGGHQNAHKRERQHAKRAHLQSVMAHNSITDGHMYGLMNYRLGSTPMPTLTYPSWNDSSNTTIISQNRFYGNHDSFSQRPLNGSPLAMWRIPAVQSNQSFNGDRSLMPSPLFQGDNLKSAMITGSSSQSRHVYELKGKVQDNVSLDLHL* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g00333 237 Gene3D Classic Zinc Finger 51 125 - -
Eupl05g00333 237 PANTHER ZINC FINGER PROTEIN GIS 1 237 IPR044291 GO:0003700|GO:0009739|GO:0010026|GO:0010090
Eupl05g00333 237 SUPERFAMILY beta-beta-alpha zinc fingers 71 102 IPR036236 -
Eupl05g00333 237 ProSiteProfiles Zinc finger C2H2 type domain profile. 74 101 IPR013087 -
Eupl05g00333 237 MobiDBLite consensus disorder prediction 46 68 - -
Eupl05g00333 237 ProSitePatterns Zinc finger C2H2 type domain signature. 76 96 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g00333 Eupl-Chr5 9723363 9724603 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g00333 6 237 C2H2 Transcription Factor Family AT2G41940 40.000 1.39e-43 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g00333 - - jre:109011926 339.732