Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g00289 ATGAGGAAGAAGCTCGACACCCGTTTTCCGGCCTCTCGGATTAAAAAGATAATGCAAGCAGATGAGGATGTTGGGAAGATTGCAATGGCTGTGCCCCTTTTAGTTTCCAAAGCATTGGAACTATTTCTGCAAGATCTCTGTGATCGGACATATGACATAACCCTTCAAAGAGGAGCAAAGACCATGAGTTCTTTGCATTTAAAACAGTGTGTGCAAAGCTTCAATGTCTTCGATTTTCTGAGAGAAATTGTTAGCAAGGTTCCGGATTTAGGTGGTTCTGATGCTGCTGGTGAGGATAGACCTGTTGCCAAGAGAAGGAAAGCTGCAGATGATGAAGGCAATGACAGTGATGAGGAGGCAAAGAGGAGCAGGACGCATGAGATGGGCCACATCAGCAGTAGTGGCAGAGGACGGGGGAGGGGCCGAGGAAGAGGCCGTGGGCGAGGCAGCCGAGCAATAGAGAGAGAAAGTGCCCAATTTGAGAAGTGCGAAGATGATCCTGACATGTCACCTCAACATGACAAGCAAGACCTGAACCCTGAAAGGTTGGATAATGGGGCTGAGGCCAGAGAGTCAATGGAGGCGATTGGTAATAGTACCGATGCAGGGGCGCGGAACTTCGATCTGAATGTCGGCTTGGATGAGAATGGTGACAGTGCAGCCATGGCAGTAGCAGCTCCTGCCCCATCAACGGAGCCTCCCATAATGAAGCATGAGGAGTATCCGGGTTGGTCCCTCTCTGACATGGACAAGATGACCATCGACCCTCTTCAACTTGCTCACCTCAACACAAGGTTAGATGAGGATGAGGAAGATTATGATGAAGAAGGATAA 834 0.4928 MRKKLDTRFPASRIKKIMQADEDVGKIAMAVPLLVSKALELFLQDLCDRTYDITLQRGAKTMSSLHLKQCVQSFNVFDFLREIVSKVPDLGGSDAAGEDRPVAKRRKAADDEGNDSDEEAKRSRTHEMGHISSSGRGRGRGRGRGRGRGSRAIERESAQFEKCEDDPDMSPQHDKQDLNPERLDNGAEARESMEAIGNSTDAGARNFDLNVGLDENGDSAAMAVAAPAPSTEPPIMKHEEYPGWSLSDMDKMTIDPLQLAHLNTRLDEDEEDYDEEG* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g00289 277 Gene3D Histone, subunit A 1 86 IPR009072 GO:0046982
Eupl05g00289 277 FunFam dr1-associated corepressor homolog 1 86 - -
Eupl05g00289 277 MobiDBLite consensus disorder prediction 147 181 - -
Eupl05g00289 277 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 7 120 - -
Eupl05g00289 277 MobiDBLite consensus disorder prediction 90 181 - -
Eupl05g00289 277 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 8 71 IPR003958 -
Eupl05g00289 277 SUPERFAMILY Histone-fold 4 88 IPR009072 GO:0046982
Eupl05g00289 277 MobiDBLite consensus disorder prediction 98 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g00289 Eupl-Chr5 8632251 8650575 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g00289 1 266 CCAAT-HAP5 Transcription Factor Family AT3G12480 49.828 3.46e-71 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Eupl05g00289 CBFD_NFYB_HMF 9.5e-18 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g00289 K21752 - nnu:104588779 401.749