Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g00273 ATGTCTAGTCTCCCTGCAACATCAAGCGTCGTCTCAGTTTCAGAAGAGTCTCCATGCTTGAAAGAAGAGATTAAATCTGATGATGATTTACTTGATCTGAAGCTCTCAAATAAGGAGTTGGATCATGGGTCGAAGCGTGAACTAGATTGTTTGGACGTGGGTTCTTCGAAACGGTCGGCGTCGTCGACCGTTTCGAAGAAGGAACCTCGAGTTTTTTTCTGTAACTACTGTAGGAGGAAATTCTACAGTTCTCAAGCGTTGGGTGGGCATCAAAACGCTCATAAACGCGAGAGAAGCATAGCGAAAAGAAGGCAACAAGGTATGGAGGCTGTGGGTATCGGGCACCCGTATTCGAGTATGACAACACTTCCTATTCATGGGTCTTTTAATAGATCTCTTGGTATTCGGATGCACTCAATGTTTCATAAACCATATTCGTCATGGGCACTTGCCGGACTTCGTTACGGCAATGGTGGGTGGTCAAGACCAAGTCTTTACCCACAACCTGCAGTTGGTAGGCTGAGGATGGATGATGATCATCATCAGGCTGCTAATGAACACTTTATCAGAATGCGGCCGGGAGTGGCTAGGTTCGATGGTGGTGCTAGTAGTACTGGTTGCATGTTAGGAGGTTCTCCGGCTGTTGTAGTTCCTAATACTGCAGCTAATAAGACTGTTATTAATGGTGGTCATCTTTGGGCAGGTGGTCGTTTGGAAACTCGTCAAAAGGAACCACAAGAGCTTGATTTGTCCCTCAAGCTCTGA 765 0.4614 MSSLPATSSVVSVSEESPCLKEEIKSDDDLLDLKLSNKELDHGSKRELDCLDVGSSKRSASSTVSKKEPRVFFCNYCRRKFYSSQALGGHQNAHKRERSIAKRRQQGMEAVGIGHPYSSMTTLPIHGSFNRSLGIRMHSMFHKPYSSWALAGLRYGNGGWSRPSLYPQPAVGRLRMDDDHHQAANEHFIRMRPGVARFDGGASSTGCMLGGSPAVVVPNTAANKTVINGGHLWAGGRLETRQKEPQELDLSLKL* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g00273 254 ProSitePatterns Zinc finger C2H2 type domain signature. 74 94 IPR013087 -
Eupl05g00273 254 Gene3D Classic Zinc Finger 53 114 - -
Eupl05g00273 254 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 13 254 IPR044246 GO:0009788
Eupl05g00273 254 SUPERFAMILY beta-beta-alpha zinc fingers 69 99 IPR036236 -
Eupl05g00273 254 ProSiteProfiles Zinc finger C2H2 type domain profile. 72 99 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g00273 Eupl-Chr5 7946438 7947202 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g00273 48 254 C2H2 Transcription Factor Family AT5G10970 42.202 2.12e-41 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g00273 - - ming:122071236 196.052