Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g00228 ATGGAAATATACAAGTTTCAAGAAAAAACATTCAAGTGGAAGTCAAAAAAAAGAGCAGTAATACGAATAGGATGCAAAGCACGGATGGCTATTCAATTAGGAAATGATGAAAACTATGTCGTCGTAGAGTTTGAAGAACAACACAACCACGAGCTCGTACCTCAATCTCAAGTGCATCTATTGAGATCGTTGATCCTGCGAGAGTTTGTGGAACAATATGACAAATCAGTAAGTAATCGACGCGATAATGAGATATTTGAAGATAACCGATCAAGGAAAACAAAATCAAACATGTTTACTACGTGGGAAGTAGAACAACGAACATCAGAGATATACACCAGAAAATATTTTAATGAATTCCAAGAAGAGATGTTGAAGATTATAGATTTGCGTATACAACTTGATAGTGATAATGGGACAATGCAAACATACAAAGTATCATCATATAATGGTAATAAGATTCGCACTGTTACCTATGCCCCTATAGATGACATAACCGAGGTTTCGAAAGATGCTCATTCTATCAATCATGATAACTTAGATGAAGAGAATGCTGCAAATCATTCAAATGCAAATATAGTGTTGTAG 588 0.3486 MEIYKFQEKTFKWKSKKRAVIRIGCKARMAIQLGNDENYVVVEFEEQHNHELVPQSQVHLLRSLILREFVEQYDKSVSNRRDNEIFEDNRSRKTKSNMFTTWEVEQRTSEIYTRKYFNEFQEEMLKIIDLRIQLDSDNGTMQTYKVSSYNGNKIRTVTYAPIDDITEVSKDAHSINHDNLDEENAANHSNANIVL* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g00228 195 Pfam FAR1 DNA-binding domain 12 54 IPR004330 -
Eupl05g00228 195 PANTHER OS01G0519700 PROTEIN 63 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g00228 Eupl-Chr5 6227949 6229796 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Eupl05g00228 FAR1 1.2e-09 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g00228 - - psom:113279762 101.293