Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g00212 ATGCAGGGAAAGTTCAAGGCAACTGATTCTCCTTTACCTACTGTTCCAGGTTATGATGTTGCCGGTGTGGTGGTAAAGGTGGGAAGCCAAGTGCAGAGCTTGAAGGAAGGGGATGAAGTATATGGGAACATCAATGAAAAGGCTATGGAAAACCCCAAACAATTCGGCTCTTTAGCTGAGTACACTGCTGTTGAAGAGAAACTGTTGGCTCCAAAACCCAAGAATCTGGATTTCATGCAGGCTGCTTGCCTTCCTCTCGCCATTGAGACCGCCTACGAAGGTCTCGAAAGGGCTGGGTTTTCTGCTGGTAAATCTATCCTTATATTGGGTTGTGCTAGTGGAGTTGGAACCCTAATAATTCAGGAAGCTAGCAAATAA 378 0.4603 MQGKFKATDSPLPTVPGYDVAGVVVKVGSQVQSLKEGDEVYGNINEKAMENPKQFGSLAEYTAVEEKLLAPKPKNLDFMQAACLPLAIETAYEGLERAGFSAGKSILILGCASGVGTLIIQEASK* 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g00212 125 Pfam Alcohol dehydrogenase GroES-like domain 6 45 IPR013154 -
Eupl05g00212 125 SUPERFAMILY GroES-like 10 110 IPR011032 -
Eupl05g00212 125 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 1 123 IPR044626 GO:0016628
Eupl05g00212 125 Gene3D - 2 94 - -
Eupl05g00212 125 Gene3D - 95 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g00212 Eupl-Chr5 5633365 5637021 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g00212 9 40 Monolignol Biosynthesis Gene Families AT1G72680 56.250 6.11e-06 42.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g00212 K18980 - nnu:104593206 196.438