Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g00200 ATGGAACGAGGTTCGGTTCCAGACTCTGGTCCTTCATCGGGTTCTTACGATAAGTCTAGAGTTCTTGATGTGAAGCCTTTGCGTTGTTTGGTTCCAATGTTTGCATCTCCACCACTTGGGCTTCAATCTCCTCCTCCCTTTGTCTGTGCATCGCCGTTGGGCCCGTTCCCTCCTGGGTATTCTCCATTTTACCCCTTTTCCATCCCTTCAGAACCTCAAATACCACCTGAACAACAGCACCCACAGACCCCCAGTGGAGCCACCACTCAAGCAGGAGTTTTCGGATACAACTACCATCCGATGCAGATGCCATCAACTCCAGTGTCTTCGTTTCGAACACCACCTCCACCTCCACCTCCAAAACAGATGTTTGAGGGGTCTGCGAATGGTGATGCAGGACCATCGAAGAAGAGCTCCAAAAACCGGGAAGCAGGTATACATCTGGGTGATTCTGTGAGAACAGCATCAGAAGAAGATGGATGGAGTAATAACCAGAGACAGGAACAATTGCACCCCAAAAGTGCAAAGAAGAGTGATTCTACCAGATCAGCATCAGAAGATGGGTGGACTAACAGCCGGAAGCGGGCAGTTCATCAGCTCAGTGGCTGTAATATGCCTAGTACTGATGCAGAAGCTACTAGTAATGGTGAGAGACAGAAATCTAAGTCACAAAAGAGAACGATGAACAGCCAAGAAATCAGGTTATCACCACCAGCAGACGGTGATAGTGAGTCGGTTGGGGATATTCTTGTGAAATTTGATGCGCTCAGGCGAAGACTTGCTCAAATTGAAGACTCAAAGGAAGCAAGCCCCGGGATCAAACGGTCTGACTTAAAATCTGGGACAATTATGATAAATAAAGGGCTTCGGACAAACACAAGGAAGAGAATCGGAGCTGTTCCTGGGGTTGAGATTGGAGATGTTTTCTTTTTCAGGATTGAGATGTGTTTGGTGGGATTGCACTCTCCAGTTATGGCTGGGATCGATTACATGAGTTTCAAGTTTGACCAAGAAGAAGAACCTGTGGCTGTGAGCATCGTTTCATCTGGAGGGTACGAGGATGATGTGGAGGACGGGGATATGTTGATTTACAGTGGCCAGGGTGGGAATGTGAACAAGAAAGATGGGAAGGATGTATTCGATCAAAAGCTGGAAAGAGGTAATCTCGCCCTGGAGAGAAGTTTGCGTCGGGCAAATGAGGTAAGAGTAATTCGGGGTGTGAAGGATGTGGGGAATCCATCTGCGAAGGTCTACATCTATGATGGTCTCTATAAAATCCATGAGTCATGGATGGAGAAAGGGAAGTCGGGTTGCAACGTTTTCAAGTATAAGTTGCTTCGAGTACCTGGGCAGCCTGAGGCATTTGTAATGTGGAAATCAATCCAGCAATGGAAGGAAGGTGTCACTTCTAGGCCTGGCATTATATTGCCGGACCTAACCTCAGGGGCAGAAAAATTGCCAGTTTCTCTTGTAAATGATATTGATGATGAGAGGGGGCCTGCTCATTTCACATATTCCCCTAGTCTCAAGTATTCAAAACCAGTTAACTCAATGAAAGCTTCTGTTGGCTGCAATTGCCGTAGTGCATGCCTCCCAGGTGACCCTGATTGCTCTTGTGTTCGGAAAAACGGAGGTGATCTCCCATATATTGCCAATGGAATCCTTGTGATGTGGAAACCCTTGATACATGAGTGTGGTCCTTCATGCCTCTGCCATCCTAATTGCCGGAACCAAGTGTCCCAAAATGGTCTGAAAGTCCGCTTGGAGGTGTTTAAGACAAAGGATAGAGGTTGGGGACTACGGTCTTGGGATCCCATTCGGGCAGGTATGTTTATTTGTGAATATGCAGGTGAAGTCATAGATAAAATTAAGGTAGAGGAGGATGGGGATGAAGATGAAGAAGACGAGTATATCTTCGATGCAACCCGCACCTGTTACAACTCATTTGAATGGAATTACATACCCGAGTTACTAGGAGAAGAGAGGCATGGTGGCTTGAATGAGGCATACAAACCCCCATTACGCCTGACCATAAGTGCAAAAAACAATGGAAACGTAGCTCGTTTTATGAACCATAGTTGCTCCCCAAATGTCTTTTGGCAGCCAGTCTTACATGAACATAATGACGAATCCTATCCTCATATTATGTTTTATGCAATCAAACACATTCCTCCCATGACAGAGTTGACATACGATTATGGGCTCAGTGGGGCGCACAGTAGTAATGTGCATGACAAGAGGAGAAAGTGTTTATGTGTATCGTCGAAATGCAGAGGTTATTTTGGCTAG 2289 0.4613 MERGSVPDSGPSSGSYDKSRVLDVKPLRCLVPMFASPPLGLQSPPPFVCASPLGPFPPGYSPFYPFSIPSEPQIPPEQQHPQTPSGATTQAGVFGYNYHPMQMPSTPVSSFRTPPPPPPPKQMFEGSANGDAGPSKKSSKNREAGIHLGDSVRTASEEDGWSNNQRQEQLHPKSAKKSDSTRSASEDGWTNSRKRAVHQLSGCNMPSTDAEATSNGERQKSKSQKRTMNSQEIRLSPPADGDSESVGDILVKFDALRRRLAQIEDSKEASPGIKRSDLKSGTIMINKGLRTNTRKRIGAVPGVEIGDVFFFRIEMCLVGLHSPVMAGIDYMSFKFDQEEEPVAVSIVSSGGYEDDVEDGDMLIYSGQGGNVNKKDGKDVFDQKLERGNLALERSLRRANEVRVIRGVKDVGNPSAKVYIYDGLYKIHESWMEKGKSGCNVFKYKLLRVPGQPEAFVMWKSIQQWKEGVTSRPGIILPDLTSGAEKLPVSLVNDIDDERGPAHFTYSPSLKYSKPVNSMKASVGCNCRSACLPGDPDCSCVRKNGGDLPYIANGILVMWKPLIHECGPSCLCHPNCRNQVSQNGLKVRLEVFKTKDRGWGLRSWDPIRAGMFICEYAGEVIDKIKVEEDGDEDEEDEYIFDATRTCYNSFEWNYIPELLGEERHGGLNEAYKPPLRLTISAKNNGNVARFMNHSCSPNVFWQPVLHEHNDESYPHIMFYAIKHIPPMTELTYDYGLSGAHSSNVHDKRRKCLCVSSKCRGYFG* 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g00200 762 Pfam Pre-SET motif 480 577 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Eupl05g00200 762 Pfam SAD/SRA domain 297 451 IPR003105 -
Eupl05g00200 762 SUPERFAMILY SET domain 463 735 IPR046341 -
Eupl05g00200 762 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 136 757 - -
Eupl05g00200 762 Gene3D SET domain 469 761 IPR046341 -
Eupl05g00200 762 ProSiteProfiles Post-SET domain profile. 746 762 IPR003616 -
Eupl05g00200 762 SMART preset_2 476 570 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Eupl05g00200 762 MobiDBLite consensus disorder prediction 64 79 - -
Eupl05g00200 762 ProSiteProfiles SET domain profile. 586 734 IPR001214 GO:0005515
Eupl05g00200 762 SMART set_7 586 740 IPR001214 GO:0005515
Eupl05g00200 762 MobiDBLite consensus disorder prediction 194 214 - -
Eupl05g00200 762 MobiDBLite consensus disorder prediction 64 246 - -
Eupl05g00200 762 FunFam Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5 281 466 - -
Eupl05g00200 762 MobiDBLite consensus disorder prediction 109 123 - -
Eupl05g00200 762 ProSiteProfiles Pre-SET domain profile. 522 583 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Eupl05g00200 762 SUPERFAMILY PUA domain-like 281 469 IPR015947 -
Eupl05g00200 762 SMART G9a_1 293 451 IPR003105 -
Eupl05g00200 762 Gene3D - 281 468 IPR036987 -
Eupl05g00200 762 ProSiteProfiles YDG domain profile. 298 447 IPR003105 -
Eupl05g00200 762 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 142 762 IPR025794 GO:0016571
Eupl05g00200 762 MobiDBLite consensus disorder prediction 170 193 - -
Eupl05g00200 762 Pfam SET domain 597 734 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g00200 Eupl-Chr5 5361135 5365519 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g00200 11 762 Su(var)3-9 homologs AT1G73100 48.874 0.0 668
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Eupl05g00200 SAD_SRA 1.7e-51 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g00200 K24405 - nnu:104593573 960.674