Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g00188 ATGGCGGCTCAACCGAGGGTTCTGCTTATTTCCTACTCAAAGGAGATCACAAATGGAGAGCCAATATATGTTTCATCAAATTGTCTTCCCGTTAAGGCCATAAACTTTGAGCCCGCAGGGCATACATTCCATTCAGCCGCACTTAAACTTCGTGGTTTTTTTGAGGAAGAAGACACAGATGCTGAGGATCAGAATTTGCCCAATGATAAGGGACAGACTTTTATGGCATCCTCAGATTCATATAGCGGTAAAGGAAAAAAGAAATCCGGTGCTGGAGGCACACAACAAGACCATTACGCATTATTGGGTTTGGGGCATCTACGATTTCTGGCTACTGAGGAACAGATAAAAAAGAGCTACAGAGAGACTGCCTTAAAGCATCACCCTGACAAACAGGCTGCTCTTCTTCTTCTCGAGGAAACTGAAGCTGCAAAGCTAGCGAAGAAAGATGAAATAGAGAACTATTTCAAATCCATCCAAGAAGCCTATGAGGTCCTGATAGATCCTGTGAAGAGAAGGATTTATGACTCGACTGACGAATTTGATGATGAAATCCCAACTGACTGTGCCCCACAGGATTTCTTCAAGGTATTTGGTCCAGCTCTTATGAGGAATGGACGCTGGTCAGTCAACCAACCAATCCCATCATTAGGTGAAGAGAGTACTCCATTGGAAGAAGTAGATAGTTTCTATGATTTTTGGTACAGCTTTAAAAGCTGGAGAGAGTTTCCCCATGCAGATGAGTTTGATCTTGAGCAAGCCGAGTCTCGTGACCATAAGAGATGGATGGAGAGGCAGAACTCCAAACTTAGAGAGAAGGCAAGGAAGGAAGAATATGCACGGGTACGTTCTCTTGTTGACAATGCTTATAGGAGGGATCCAAGAATTCTGAGGAGAAAAGAAGAGCAGAAAGCAGAGAAGCAGAAGAAGAAGGAAGCCAAGTTCCTGGCAAGGAAGATGCAGGAGGAAGGGGCTGCCAGGGCTGCTGAAGAGGAGAGACGCCAGAAAGAGGAGGAGGACAAAAGGGCTGCTGAAGCGGCTTTGAACCAGAAGAAGTTGAAGGAGAAAGAGAAGAAGCTCTTGCGCAAAGAGCGGACTCGTTTACGGACACTCTCAGCACCCCTTGTATCTCAACATTTGCTTGATCTCAAGGGAGATGACGTGGAGAGTTTATGTATGTCATTTGATATTGATCAGCTGAGGAGTCTGTGTGATGAGGTTGAGCGCAAAGAAGGGATTGGGCGGGCCCAACTTCTCAAAGATGCACTGGGAGGAGGTAGTAGCTTCAGGGAGACGAAGCAAGATGAGAAGAAACCACAACATAATGATTCTCTAGAGGTAAATGGATATGGCACTGGTGTGCAGTTCAAGCCAGATAATCCGTTAAACAGCTATGAGAAAAAGGAGAAACCTTGGGGCAGAGAAGAGATTGAATTGTTGAGGAAAGGGATGCAGAAATATCCCAAAGGAACGTCTCGGAGGTGGGAGGTTATCTCTGAGTACATTGGTACGGGAAGATCAGTAGAAGAGATTCTTAAGGCAACCAAGACAGTTCTTCTCCAGAAGCCGGACTCTGCCAAAGCCTTCGATTCATTCCTTGAGAAGAGAAAACCTGCACAGAGTATTGCATCCCCTCTGACAAGCAGACAGGAATCAGGAGTAATGACCCCTACTGATGGGCTTGAAAACAGTGCTCCTATAATGGTTAATTCCAAGCAGTCTCCGAGCAGTGGCGGGGAACACCAGAATACTGAAAGTTTGAATGGGGTTTCTTCTGTGGAACAAGATGTGTGGTCTGCCATTCAAGAAAGAGCACTGGTTCAGGCTCTGAAAACGTTCCCCAAGGAAACAAATCAGCGTTGGGAACGTGTTGCAGCAGCAGTTCCTGGGAAGACAGTGAACCACTGCAAGAAGAAATTTGCATTGCTGAAGGAGAACTTCAGAAACAAGAAAAATGTGGATTAG 1965 0.4565 MAAQPRVLLISYSKEITNGEPIYVSSNCLPVKAINFEPAGHTFHSAALKLRGFFEEEDTDAEDQNLPNDKGQTFMASSDSYSGKGKKKSGAGGTQQDHYALLGLGHLRFLATEEQIKKSYRETALKHHPDKQAALLLLEETEAAKLAKKDEIENYFKSIQEAYEVLIDPVKRRIYDSTDEFDDEIPTDCAPQDFFKVFGPALMRNGRWSVNQPIPSLGEESTPLEEVDSFYDFWYSFKSWREFPHADEFDLEQAESRDHKRWMERQNSKLREKARKEEYARVRSLVDNAYRRDPRILRRKEEQKAEKQKKKEAKFLARKMQEEGAARAAEEERRQKEEEDKRAAEAALNQKKLKEKEKKLLRKERTRLRTLSAPLVSQHLLDLKGDDVESLCMSFDIDQLRSLCDEVERKEGIGRAQLLKDALGGGSSFRETKQDEKKPQHNDSLEVNGYGTGVQFKPDNPLNSYEKKEKPWGREEIELLRKGMQKYPKGTSRRWEVISEYIGTGRSVEEILKATKTVLLQKPDSAKAFDSFLEKRKPAQSIASPLTSRQESGVMTPTDGLENSAPIMVNSKQSPSSGGEHQNTESLNGVSSVEQDVWSAIQERALVQALKTFPKETNQRWERVAAAVPGKTVNHCKKKFALLKENFRNKKNVD* 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g00188 654 Coils Coil 319 364 - -
Eupl05g00188 654 SUPERFAMILY Homeodomain-like 596 651 IPR009057 -
Eupl05g00188 654 SUPERFAMILY Homeodomain-like 466 512 IPR009057 -
Eupl05g00188 654 SUPERFAMILY Chaperone J-domain 95 175 IPR036869 -
Eupl05g00188 654 CDD SANT 471 511 IPR001005 -
Eupl05g00188 654 Gene3D DnaJ domain 81 189 IPR036869 -
Eupl05g00188 654 Pfam DnaJ domain 97 176 IPR001623 -
Eupl05g00188 654 Gene3D - 464 522 - -
Eupl05g00188 654 Gene3D - 591 652 - -
Eupl05g00188 654 CDD SANT 598 644 IPR001005 -
Eupl05g00188 654 CDD DnaJ 97 168 IPR001623 -
Eupl05g00188 654 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 2 1 652 IPR044634 GO:0006450|GO:0030544|GO:0043022|GO:0051083
Eupl05g00188 654 MobiDBLite consensus disorder prediction 66 84 - -
Eupl05g00188 654 MobiDBLite consensus disorder prediction 564 589 - -
Eupl05g00188 654 ProSiteProfiles Myb-like domain profile. 590 640 IPR001005 -
Eupl05g00188 654 MobiDBLite consensus disorder prediction 424 469 - -
Eupl05g00188 654 FunFam Myb family transcription factor 592 652 - -
Eupl05g00188 654 SMART dnaj_3 96 171 IPR001623 -
Eupl05g00188 654 ProSitePatterns Nt-dnaJ domain signature. 156 175 IPR018253 -
Eupl05g00188 654 PRINTS DnaJ domain signature 120 135 IPR001623 -
Eupl05g00188 654 PRINTS DnaJ domain signature 102 120 IPR001623 -
Eupl05g00188 654 PRINTS DnaJ domain signature 151 171 IPR001623 -
Eupl05g00188 654 ProSiteProfiles Myb-like domain profile. 464 519 IPR001005 -
Eupl05g00188 654 ProSiteProfiles dnaJ domain profile. 97 179 IPR001623 -
Eupl05g00188 654 MobiDBLite consensus disorder prediction 320 340 - -
Eupl05g00188 654 MobiDBLite consensus disorder prediction 58 93 - -
Eupl05g00188 654 SMART sant 594 646 IPR001005 -
Eupl05g00188 654 SMART sant 468 521 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g00188 Eupl-Chr5 5062156 5064120 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g00188 98 297 C2H2 Transcription Factor Family AT1G74250 27.615 1.20e-17 85.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Eupl05g00188 DnaJ 1.7e-17 CL0392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g00188 K09522 - nnu:104593549 915.605