Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g00135 ATGAAGAGGTCTCCTTCTTCTTCTTCTTCCTCCTCTGTTTCCTCTACTACTGAACCTCCTCCTCCTCCTTCTCCGCCTTCTCCTTCTCCATCTCCTCCTTCTCTTCAACCTGCCAAACCCAAGACCAAACGAACCAGAAGAAATCTGAATCCAGAGAAACGTCAGTTTGCTAACAGCCCAGGAAGGAGAAGTTCCATTTACAGAGGGGTAACCAGGCATAGATGGACAGGGAGGTATGAAGCTCATCTCTGGGACAAAAACTCATGGAATCCTATTCAGAACAAGAAGGGACGACAAGTTTATTTGGGTGCCTATGATGATGAGGAGGCTGCTGCTCATACGTATGATCTTGCTGCTCTCAAGTACTGGGGCCCAGATACCATCTTGAATTTTCCGATAAATACATACACAAAGGAGTTTGGAGAAATGCAGAATGTGTCCAAGGAAGAGTATTTAGCTTCATTAAGGCGGAGGAGTAGTGGGTTTTCTAGAGGAGTCTCAAAGTATCGTGGGGTGGCCAGGCACCATCACAACGGGCGGTGGGAGGCGAGAATTGGACGTGTTTTTGGGAACAAATATCTCTATTTGGGAACTTATAGTACGCAAGAAGAAGCAGCTGCAGCATACGACATTGCGGCCATAGAGTACAGAGGCTTGAATGCGGTGACGAATTTCGATATCAGCCATTATGTAAGATACCCACAACAACAACAACAACAAGCACCACCACCATTACAACAATCCTTCCATTTTAATGAATCACAAGAGGTGGACCCATGTCAGATCCTCACACCTGATCTCCCGAATACCGTCGATCAGTCGGCAATTGTGTACCCGATCGGAGAAAACCCGTGGAGTAGTCTATGCATGGATTCTGGATTCAACCCACTTCCTGTACCCGAAATTGGGCTCGAAAAGTCGAGCGAATTAGCGGATTGGTTCAACGACACCGGGTTCGAAGAGAACATAGACTTCCTATTTGAGGGGACAAGTAACAAAGGGATAGGAAGTGTGGAGGAGGAAAATGGGATGAATTTGGATGGCATTTTTGAGAATTCAGTTGGGATGGATGGGGATATATTGGGTGGTATGGTGCAGGGAGAGGAACGTGCACTGGCGGTGGAGAGGGAGGGGTTGTCTACTTCAACAACCACATCGGTTTCGTACCCATTTCCTATTAGCATTTGTTCTTAG 1194 0.4682 MKRSPSSSSSSSVSSTTEPPPPPSPPSPSPSPPSLQPAKPKTKRTRRNLNPEKRQFANSPGRRSSIYRGVTRHRWTGRYEAHLWDKNSWNPIQNKKGRQVYLGAYDDEEAAAHTYDLAALKYWGPDTILNFPINTYTKEFGEMQNVSKEEYLASLRRRSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYSTQEEAAAAYDIAAIEYRGLNAVTNFDISHYVRYPQQQQQQAPPPLQQSFHFNESQEVDPCQILTPDLPNTVDQSAIVYPIGENPWSSLCMDSGFNPLPVPEIGLEKSSELADWFNDTGFEENIDFLFEGTSNKGIGSVEEENGMNLDGIFENSVGMDGDILGGMVQGEERALAVEREGLSTSTTTSVSYPFPISICS* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g00135 397 MobiDBLite consensus disorder prediction 1 69 - -
Eupl05g00135 397 MobiDBLite consensus disorder prediction 1 15 - -
Eupl05g00135 397 SUPERFAMILY DNA-binding domain 167 228 IPR016177 GO:0003677
Eupl05g00135 397 ProSiteProfiles AP2/ERF domain profile. 66 132 IPR001471 GO:0003700|GO:0006355
Eupl05g00135 397 SMART rav1_2 168 232 IPR001471 GO:0003700|GO:0006355
Eupl05g00135 397 SMART rav1_2 66 138 IPR001471 GO:0003700|GO:0006355
Eupl05g00135 397 FunFam AP2-like ethylene-responsive transcription factor 167 228 - -
Eupl05g00135 397 ProSiteProfiles AP2/ERF domain profile. 168 226 IPR001471 GO:0003700|GO:0006355
Eupl05g00135 397 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 30 242 - -
Eupl05g00135 397 FunFam AP2-like ethylene-responsive transcription factor 65 134 - -
Eupl05g00135 397 PRINTS Ethylene responsive element binding protein signature 67 78 IPR001471 GO:0003700|GO:0006355
Eupl05g00135 397 PRINTS Ethylene responsive element binding protein signature 208 228 IPR001471 GO:0003700|GO:0006355
Eupl05g00135 397 SUPERFAMILY DNA-binding domain 65 134 IPR016177 GO:0003677
Eupl05g00135 397 Gene3D AP2/ERF domain 167 228 IPR036955 GO:0003700|GO:0006355
Eupl05g00135 397 Gene3D AP2/ERF domain 66 134 IPR036955 GO:0003700|GO:0006355
Eupl05g00135 397 Pfam AP2 domain 167 218 IPR001471 GO:0003700|GO:0006355
Eupl05g00135 397 Pfam AP2 domain 66 124 IPR001471 GO:0003700|GO:0006355
Eupl05g00135 397 CDD AP2 167 228 IPR001471 GO:0003700|GO:0006355
Eupl05g00135 397 MobiDBLite consensus disorder prediction 16 37 - -
Eupl05g00135 397 CDD AP2 65 134 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g00135 Eupl-Chr5 3456101 3459032 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g00135 36 230 AP2-EREBP Transcription Factor Family AT1G72570 64.000 2.49e-86 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Eupl05g00135 AP2 1.2e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g00135 - - msin:131227862 489.189