Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g00118 ATGGTCCTCTTGGAGGTCTTGAGCATCCTGTCTACACCCGTCACAGAAATTGTGAAGGGTTCAATTGCTCCAGTTGTGTGTCAGATCGGTTATGTCGTTCATTGCAAGAAAAATATTGACGACCTTGGAAAGAAACTGCTAGAATTGGAAAGCATGAACGATGACGTAAAAGGATCGGTTGAGGCAGCTGAGAGGGGAGGACAAGTTATAAAAACTGCAGTACGACTGTGGCTAGAAGAGGTAGACACCATTGAAAAGGAGGTGAAGCGATTGGTCCAAGCAGCTCAGATGAGAGGATTAGTACTGATCGAAACAGAAGTAGAAGAAGAGCGGCTGTTAAGAAGGGTGGAAAGTGTTGAAATTGAGGCAACACAATTGATTGTTGAAGCCAAAAACATGGATGGATGTTTCAAAGGCGGGTGGTGTTATCGTTATAGTCTTGGTAAAGAAGCAAAACTTATGATTGGTGTTGTTGATAAGCTCCTGAATGAAAGGAATTTCGATAATGTATCAGACCCTCCGCTTACTCCAACCATAGAATCCATGTATTCTGGAGATTTCGAAGCTTTTCAATCTACAAAATCAGCTATGAAGAAGGTCATGGACGCATTGAAGGATGAGAGAATTAACATAGTCGGGGTGTACGGGATGGGAGGAGTAGGCAAGACAACCTTGATGAAGGAAGTAGCCAAACAAGTGAAAAACGATAAGATTTTTGATGAGGTAGTCATGGCAACCGTGTCCCAGAACCCTGACTTGAAAAGTATTCAAGGTGAAATTGCAGAGAAATTGGGCCTGCCTCTTCTAGAGAAGAGCAAATCCTTTAGAGCAAGACGGTTAGCGGAGAGTTTGAAGCGAGAGAAGCGCATCCTCGTGATCTTAGATGATGTATGGAGAAGACTGGAACTAGCTGAGGTGGGAATCCTCAACCACAAGGGTTGCAAAGCTGTACTCACAACAAGAAGGCTAGATGTATGTAATACGATGATGACCCAAAAAAATAATCTAGTTAACGTCCTATCAGAACAAGACTCGTGGCATCTTTTCCATAAGAACGTGGGTGATGTTGTAAACTCTCCTGCTTTGCATGAAGTTGCTTGGAAGGTTGTTAAAGAGTGTGGGGGTTTGCCCATAGCACTTGTTACACTTGGAAGGGCAATGCGAGGCAAGGACAACAAAATAGTGTGGGAAGATGTAGCTACAAAATTAAGAAAGTCTATGCCGATAGACATTGAAGACATGGATAAAGAGGTGTGCAACTCAATAAAGTTGAGCTACGATTATTTAGAAAGCGAAGAAACCAAAAAATGCTTCTTGTTTTGTTGTTTATTTTCCGACGAACACCAAATTCACATGGATCGATTGATGATGTATGTGATGGGGGAAGCACTATTGGAAGATGTAGACACTTTGGACGAAGCGAGGGGTAGATTGCATACAATGGTCGACAAACTTATAGCTTCATCTTTGTTGTTAAAAAGCTATGACGATGGAAGTGTAATGATCCACGACATTGTGCGTGATGTGGCCATATCTATTGCTAAAGAAGACATTAATGGGTTTATTGTAAAAGCCGGTACAAGATGGACACAATGGCCACCGGAGAGGAAGAAGTTGAGTAAATGCATGCGAATGTCTCTAATGGAGAACAAAATCAATGAGCTTCCCACTCGACCTGAATGCCCACAACTTTTGACCTTATCATTGAGAAGGAATAGGTCTTTGAAGGAACTCCCTGATAGTTTTTTCGAAAGCATGAAATCCCTTGTAACTCTAGATCTGAGTTACACTTCTATTTCGTCCCTACCACCATCAATCTCATGCCTCGTGAACCTTCGGACACTTTGCCTAGATAATTGTGAATTGTTAAGAGATGTATCTCTAATTGGAAAATTGAAGAATCTCGAAATACTTAATCTAGCCGGGACTAACATACGAAGTTTACCGGAAGAAATAAGAGGATTGACGAATCTAAAGTTGTTAAACTTGTCGTATACTGATATTGAAATAATTCAGCCAAACGTGATATCAAGCTTGTCTCACTTAGAAGAACTATACATGAATTATAGCTTCAGTGGGTGGGAGAGTGAGAGAATGGGAGATGGAAGTAAAGCTAGCTTTAATGAGGTGGTATCCTTGACTTGCTTGACTACTCTATACTTGAAGATAAAAAATGTCGAGTTTTTGTCCGAAGAAATTCCTAATTGTTGGAAAAACTTAACAAAGTTTGAGATAAGAGTGGGTAACCATTACAATATTTATGGAGCCCCGTGGAGTTTGCAATGTATGCTCCTTGATTTTACATTAGATCCGATTCCGAATTGGGTTAAGCTGTTGTTGCAAAGAATAGAAAAACTAATATTGCAAGATTGTAAGGGTTGCAAGAATGTTTTACAAGTTGATGCAGGAGGATTTAACAACTTGAAGTCTCTTGATGTCAAATATTGCCATGAAATGAAATATCTTATGAGTGTGGTAGAAGAATTTCTAGAAAATACATCAAGTAGTTTGGAGCAATCAGACTCAAGAGACATGGACAACTTGAAGGCAATCTCAGTATTCCTTGAAAAATTAACAACCCTTCAAGTGTTTGGCTGCAAAAAATTAATAAAAATTCTTCCCTCCAATTTGTTGCTAAGTATACAGAATCTGGAAGAACTCCATGTGTACAGTTGTCCTGCGTTGGAGGAGGTATTTAACTCGGAGGGACTCGAGGAAGGGCATATTACGAACTCTATATTAAGAGAGGAGGTCCTTCAGACTATTACTTCAACCACCAACACCAGATCAAGGCAGTCGAATTCCAGTACTTTGTCTACTTCACCACCGCCTCCAATCTTCTTAAACCTAAGAGAGTTATTAATCAGAGATTGCAGGCGCCTGAAGCACCTCTTCCCTACAATGAGACTAGTTCGAGGTCTCCAGCAATTAGAAAAACTTGAAATATCTAAATGCGATGAGATGGAGCAGATAATTGTTGATGAAGATGAGGGTGAAGAAGCAGAAGAGAATGACAAGACAGTACTCCCTCGATTAGAGAACCTAAAGCTGACATTTTTAGAAAAGCTCTCAAGTTTCTTCCAAAGAAAGTTACTTCTTGATTGGCCCTCATTGGAAACCCTACACGTGGAAGGTTGTCTGAATTTGAAGATGCTTCCTTTGGGTCCCCAAAGTGCACCCAAACTGAGAGAAGTCATTGGAGATGATGTTGAATGGTTAGAAGGGTTGGAGTGGGAAGATGAAAGTGTAAAGTCGCGCATACAACTCCTCTTTTCTGATGAAAATAGGGTATTTGATGTCCCAGATGACTCAGATGACTCGGATGACTCAGAGGACTAA 3339 0.4061 MVLLEVLSILSTPVTEIVKGSIAPVVCQIGYVVHCKKNIDDLGKKLLELESMNDDVKGSVEAAERGGQVIKTAVRLWLEEVDTIEKEVKRLVQAAQMRGLVLIETEVEEERLLRRVESVEIEATQLIVEAKNMDGCFKGGWCYRYSLGKEAKLMIGVVDKLLNERNFDNVSDPPLTPTIESMYSGDFEAFQSTKSAMKKVMDALKDERINIVGVYGMGGVGKTTLMKEVAKQVKNDKIFDEVVMATVSQNPDLKSIQGEIAEKLGLPLLEKSKSFRARRLAESLKREKRILVILDDVWRRLELAEVGILNHKGCKAVLTTRRLDVCNTMMTQKNNLVNVLSEQDSWHLFHKNVGDVVNSPALHEVAWKVVKECGGLPIALVTLGRAMRGKDNKIVWEDVATKLRKSMPIDIEDMDKEVCNSIKLSYDYLESEETKKCFLFCCLFSDEHQIHMDRLMMYVMGEALLEDVDTLDEARGRLHTMVDKLIASSLLLKSYDDGSVMIHDIVRDVAISIAKEDINGFIVKAGTRWTQWPPERKKLSKCMRMSLMENKINELPTRPECPQLLTLSLRRNRSLKELPDSFFESMKSLVTLDLSYTSISSLPPSISCLVNLRTLCLDNCELLRDVSLIGKLKNLEILNLAGTNIRSLPEEIRGLTNLKLLNLSYTDIEIIQPNVISSLSHLEELYMNYSFSGWESERMGDGSKASFNEVVSLTCLTTLYLKIKNVEFLSEEIPNCWKNLTKFEIRVGNHYNIYGAPWSLQCMLLDFTLDPIPNWVKLLLQRIEKLILQDCKGCKNVLQVDAGGFNNLKSLDVKYCHEMKYLMSVVEEFLENTSSSLEQSDSRDMDNLKAISVFLEKLTTLQVFGCKKLIKILPSNLLLSIQNLEELHVYSCPALEEVFNSEGLEEGHITNSILREEVLQTITSTTNTRSRQSNSSTLSTSPPPPIFLNLRELLIRDCRRLKHLFPTMRLVRGLQQLEKLEISKCDEMEQIIVDEDEGEEAEENDKTVLPRLENLKLTFLEKLSSFFQRKLLLDWPSLETLHVEGCLNLKMLPLGPQSAPKLREVIGDDVEWLEGLEWEDESVKSRIQLLFSDENRVFDVPDDSDDSDDSED* 1113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g00118 1112 SUPERFAMILY L domain-like 855 1074 - -
Eupl05g00118 1112 Pfam NB-ARC domain 195 427 IPR002182 GO:0043531
Eupl05g00118 1112 FunFam Probable disease resistance protein At1g61300 178 334 - -
Eupl05g00118 1112 PRINTS Disease resistance protein signature 284 298 - -
Eupl05g00118 1112 PRINTS Disease resistance protein signature 584 600 - -
Eupl05g00118 1112 PRINTS Disease resistance protein signature 211 226 - -
Eupl05g00118 1112 PRINTS Disease resistance protein signature 373 387 - -
Eupl05g00118 1112 SUPERFAMILY L domain-like 502 894 - -
Eupl05g00118 1112 Gene3D - 340 424 IPR042197 -
Eupl05g00118 1112 ProSiteProfiles Leucine-rich repeat profile. 588 609 IPR001611 GO:0005515
Eupl05g00118 1112 Gene3D - 178 339 IPR027417 -
Eupl05g00118 1112 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 882 1062 - -
Eupl05g00118 1112 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 441 IPR027417 -
Eupl05g00118 1112 Gene3D - 425 512 IPR036388 -
Eupl05g00118 1112 Coils Coil 102 122 - -
Eupl05g00118 1112 SMART LRR_typ_2 586 609 IPR003591 -
Eupl05g00118 1112 SMART LRR_typ_2 632 654 IPR003591 -
Eupl05g00118 1112 SMART LRR_typ_2 561 585 IPR003591 -
Eupl05g00118 1112 SMART LRR_typ_2 655 678 IPR003591 -
Eupl05g00118 1112 Pfam Leucine rich repeat 634 688 IPR001611 GO:0005515
Eupl05g00118 1112 Pfam Leucine rich repeat 562 622 IPR001611 GO:0005515
Eupl05g00118 1112 Gene3D Ribonuclease Inhibitor 855 1067 IPR032675 -
Eupl05g00118 1112 Gene3D Ribonuclease Inhibitor 525 853 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g00118 Eupl-Chr5 2865475 2869541 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g00118 209 534 WRKY Transcription Factor Family AT5G45050 26.807 4.64e-15 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g00118 - K13459 msin:131221436 790.03