Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g00117 ATGGCGTCAGCAAAGGTCAGCCATGGGGGATTCATAATAGACGACTCGTTGACGTGCTATCGACCAAACCATATCACTTCAAATGGTATCGAGTATTTGCTCAAACCCGAATCCATTCTGGAATACTCGTTTCCACTTCTGACGTTGCAGGTGTCTCTCATCTTCGCCATCTCACGAACCCTTCACTTTCTCCTAAAGCCGCTTCGCCAGCCCATGATTAATTCCCAGATCCTCGCTGGAATTATACTAGGTCCTTCAGTGCTGGGGCGAAACAAGGATCTTGTAAGTGTAATGTTCAATGAGAGAAGTACAAATTTACTCCTTCACCTTGCAATGATAGGCTTAATGTTTTGTGTGTTCCTACTTGGAGTGAAGACGGACGTAACCCTGATATTTAGATCAGGAAGAAAGTTCATTGCTATTGGTGTTTTAGGCTTCATCATTCCTTGGATAGTGATCAAACCCGTTGCTGCGTTCCTAATCAGTGTTTTAAAGCTGGGTCCTGAATTCAAGACTGGGTCGTTGGTTGTTGGATCAGCAGCATTAGCTAGGAGTACATTTCCCGCTGTTGCAACCCTCCTGACAGAGCTCAAGATGCTCAATTCAGAGCTGGGTCGCCTCGCATTGTCTTCATCATTGATCTCGGAACTAGTCAGCCATGTTATGTTAGTGAGCTTCACGACGGTGAATTTATCAAAGAACTCACAACATAAGATTAGTTTTGCCTCAATAATCCTAGGATCGTTTGTTTCCTTTCTGTGCCTAATCGCGGTATTGGTTCCACGAGTGATGCGTTGGATGATCAGACAGACCCAGGAAGGAAAGCCCGTGAAGGAAATCTACATCTTGTCCATCCTTATGGCAGTCATGGTATCTGGATTCATCACTCATGCGTTGGGGCTACCGGTCCTTTTTGGGCCTTTTGTTTTGGGAATAGCTGTATCAGATGGGCCGCCCATAGGATCAGCTTTGGTGAATAGGATTGAATCCTTTAGTACAGATTTCTTGATGCCACTCTTCTTAACAACATGTGGCTTGAGAACAGATCTTCACACAATTCTTGATCGTGAGAGTCTAGTGATCTTGATATTTCTCATCATTTTTACTTTCTTCGGGAAGATCGCAGGGATTATGTTGCCTTGTTTTTTTTGCAAGATTCCTGTTCTTGATGCGATGACGCTTACCTTCATAATGTGTGCCAAAGGGTTGATGGAATTGTACCTATTTAGCATTTGGCTAGACGCCCAGAGGATGGATACCAAAGTCTTCACCATTATGGTTACATCAGTGGTCGTGGCAGCCGGTATTGTGACACCCCTTGTTGAAGCTTTCTACGATCCTTCAAGGAAATATGTTGGCTACAACGATAGAACCATCCAATACTCCAAACAAGATGCTGAACTCTGCATACTCGCCTGCGTCCATGAACAAGATAATGTACCCACCATCATCAAGCTCTTGGAAGCATCAAATCCCACTAGAGAGAACCCCATGTATGTTTGTGTGGTCCATCTTATCGAGCTTATTGGCCGTGCCGCGCCCATCCTCATCTCCCACCAATCACAAAAAAATAAATTCTCCAGTGCCTCCGGAACGGAACATGTCATCAATGCCTTCCAAAACTACGAGCAACAAAACAAGTACACCGTCACAGTGAAAGCCTTCACCTCAATCTCTCCAATCAACTCCATGCACGACGATGTATGCATGCTTGCTCTTGACAAGAAGACGTCCCTAATAATCCTCCCATTCCACAAGATATGTTTCGACTATGGCACCATGAGTTCAGGGAAGTCTACTTTGAGGAATCTGAATAGCAATGTCATCGACTCGGCCCCTTGCTCCGTAGCAATTCTTGTCGACCGTTGGCACCTAAGTGGCTCCACTCCCATGTCGCCATTCCGTGTAGCGGTGCTCTTCTTGGGGGGTGCTGATGATCGAGAGGCACTGGCATATTCCAAACGCATGGCCGAGAATACGAGGGTCAGAGTCACTGTAGTTCGATTAATTGCGTCTAGTGAGGAGAATGTAAGAGAGTGGGACAAAATGCTTGATGCGGAGGCGATAAAGGATTTTAGGTTCCACACTGTAAGAAATGAGCACGTTGTCTATGTAGAGGAGGAGGTGAGAGATGGGGTGCAAACAGCATGGGTAATTCATTCTATGGAGAACGAATTTGACCTTATAATGGTAGGGAGAAGTCACAGAATGGATTCACCATTAACATCGGGGCTTACGCAATGGTGTGAATGTCCCGAGCTGGGGAGCATCGGCGACATGCTCGCCTCATCAAATATCAAGAGTGGAATTTCCGTCTTGGTGGTGCAACAACAGAAAAGGTAG 2343 0.4563 MASAKVSHGGFIIDDSLTCYRPNHITSNGIEYLLKPESILEYSFPLLTLQVSLIFAISRTLHFLLKPLRQPMINSQILAGIILGPSVLGRNKDLVSVMFNERSTNLLLHLAMIGLMFCVFLLGVKTDVTLIFRSGRKFIAIGVLGFIIPWIVIKPVAAFLISVLKLGPEFKTGSLVVGSAALARSTFPAVATLLTELKMLNSELGRLALSSSLISELVSHVMLVSFTTVNLSKNSQHKISFASIILGSFVSFLCLIAVLVPRVMRWMIRQTQEGKPVKEIYILSILMAVMVSGFITHALGLPVLFGPFVLGIAVSDGPPIGSALVNRIESFSTDFLMPLFLTTCGLRTDLHTILDRESLVILIFLIIFTFFGKIAGIMLPCFFCKIPVLDAMTLTFIMCAKGLMELYLFSIWLDAQRMDTKVFTIMVTSVVVAAGIVTPLVEAFYDPSRKYVGYNDRTIQYSKQDAELCILACVHEQDNVPTIIKLLEASNPTRENPMYVCVVHLIELIGRAAPILISHQSQKNKFSSASGTEHVINAFQNYEQQNKYTVTVKAFTSISPINSMHDDVCMLALDKKTSLIILPFHKICFDYGTMSSGKSTLRNLNSNVIDSAPCSVAILVDRWHLSGSTPMSPFRVAVLFLGGADDREALAYSKRMAENTRVRVTVVRLIASSEENVREWDKMLDAEAIKDFRFHTVRNEHVVYVEEEVRDGVQTAWVIHSMENEFDLIMVGRSHRMDSPLTSGLTQWCECPELGSIGDMLASSNIKSGISVLVVQQQKR* 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g00117 780 Gene3D - 500 754 - -
Eupl05g00117 780 Pfam Sodium/hydrogen exchanger family 54 441 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Eupl05g00117 780 PANTHER CATION/H + ANTIPORTER 18 780 - -
Eupl05g00117 780 Gene3D - 46 450 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g00117 Eupl-Chr5 2855709 2859152 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g00117 14 777 Antiporter Super Family AT2G13620 39.268 0.0 555
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g00117 K26731 - qsu:112000456 605.905