Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g00114 ATGTCAGTCTCTCCAATTTCTTTGTTTTGGATTTCATTGAAGATGAAGAGCCGTCGATTCTCTCTTCTTTTTCTGTTGAGTCTCTCATATCTGATTTCGATTGCTGGATCAGCTTCTTCTTCTTCTTCTGCTCTCTCCAAAGACTCACTTGGAATCCCTCCTGAAGATGAGAAGTACTTCAACTCAGAGATTATTAAATGTAAAGATGGATCCAAGAAATTCAACAAAGCTCAGTTGAACGATGACTTCTGCGATTGCCCAGATGGGACTGATGAACCAGGAACATCAGCCTGCCCAGGTGGAAAATTCTATTGTAGGAATGCTGGGCATGCACCTCTTTTTTTATTCTCTTCAAGAGTGAATGATGGTATCTGTGATTGTTGTGATGGGAGTGATGAGTACGATGGTAATGTGAAGTGTCCGAACACATGCTGGGAGGCTGGCAAAGTGGCTAGAGATAAATTGAAGAAAAAGATCGCAACGTACCAGGACGGGGTTGCCATAAGGAAGCGAGAGATAGAACAAGCAAAACAAGCAACAGCAAAAGATGAAGCAGAATTGTCAAAGCTGAAAAATGAGGAGAAGATACTCAAAGGGCTTGTTCAACAACTCAAAGAGCGCAAGGAACAAATCGAAAAGGCGGAGGAGAAAGAACGCTTAGAGAAAGAAAAGGAAGAGAAGAGGAAAAGAGAAACTGAGGAGAAAGCTGAGGAGCAAGAAAAGCATTCGACAGAATGGCAACATGATGAAAATCATGACACTATTGGGGTTTCAGACGAACTGCCATTGGAACAGAATGTGGAAGAAGTCAACGACGACCCTGCAGTTGAACCTGAAAATGGTGATAATGCTGGAAATGTAGCAGCTCCCAGTCATGGAGTAAAACAGGATGCAGCAGATGGCAAGGACAACACCATGGTTGAAGCTGAAACTGGTCATGATGCTGGAAGCAAGGCATCTCCCGATCAAGTAGTAAAACAGGAGAAAGATGGATCTGATAGTACTGAGGGATTGTCAAGAGAAGAGTTGGGTCGTCTTGTTGCTTCACGCTGGACAGGAGAAAACGCTGAGCAGCAAACCAATGAAGTTGATGATACAAAAGAGGAAGAACATGAAGGGAATGAAGAGACACAAGAGAGTGCACATGACAGGGAGTATGATGGCTACGCTTCAGAAATGGATGAAGAGAACCATAAATATGATGAGGACGAGATGGAAAATGGAGACACGGATGACGAGTTTGGTGAAGAGGATCATGATGATTCTAATGCCTCCTATAAACCCCACTCGGATGATGAAGCGGATTTTTCAGATATAACAATCCCAAGTACCCCATCTTGGTTGGATAAGATACAACAAACTGTTCGGACCCTTTTACAGGCGGTTAACTTGTTTCAAACTCCAGTTGATAAATCAGGTATAAGCAATAGAAGATTTAAATTCTTGAAGTACTTAATGTGGAAAATGTGTGCATGGGAATGGGTTATTTCCTGTATTTTGACTGCTGCAGAGGCTGCTCGTGTTCGAAAGGAATATGATGACTCCAGTACAAAGTTATCTAAAATCCAGTCAAGAATATCAAGTCTGACTCAAAAGCTAAAACATGATTTTGGGAAGGAGAAGGAATTTTATTCGTTTTATGGTCATTGTGTTGAGAACAAGCAGAACAAGTATATCTACAAAGTCTGCCCATTTAAACAAGCTTCCCAGGTGGAAGGCCACAGTACGACCCAATTGGGGCACTGGGAGAAATTCGAGGACTCATACACGATCATGCTATTTTCAAATGGCGATAAATGCTGGAATGGCCCTGATAGAACTTTAAAGGTGAAGCTCAGATGTGGATTGAAAAATGAGCTAGCTGATGTTGATGAACCAAGCCGTTGCGAATATATAGCATTGTTGTCAACCCCGACTCTATGCCGTGAAGAAAAGCTGAAGGAACTACAACATAAACTAGAGTTAATGAACAAGGAACAACCCCAGAGCCATGATGAGCTGTAA 2004 0.4217 MSVSPISLFWISLKMKSRRFSLLFLLSLSYLISIAGSASSSSSALSKDSLGIPPEDEKYFNSEIIKCKDGSKKFNKAQLNDDFCDCPDGTDEPGTSACPGGKFYCRNAGHAPLFLFSSRVNDGICDCCDGSDEYDGNVKCPNTCWEAGKVARDKLKKKIATYQDGVAIRKREIEQAKQATAKDEAELSKLKNEEKILKGLVQQLKERKEQIEKAEEKERLEKEKEEKRKRETEEKAEEQEKHSTEWQHDENHDTIGVSDELPLEQNVEEVNDDPAVEPENGDNAGNVAAPSHGVKQDAADGKDNTMVEAETGHDAGSKASPDQVVKQEKDGSDSTEGLSREELGRLVASRWTGENAEQQTNEVDDTKEEEHEGNEETQESAHDREYDGYASEMDEENHKYDEDEMENGDTDDEFGEEDHDDSNASYKPHSDDEADFSDITIPSTPSWLDKIQQTVRTLLQAVNLFQTPVDKSGISNRRFKFLKYLMWKMCAWEWVISCILTAAEAARVRKEYDDSSTKLSKIQSRISSLTQKLKHDFGKEKEFYSFYGHCVENKQNKYIYKVCPFKQASQVEGHSTTQLGHWEKFEDSYTIMLFSNGDKCWNGPDRTLKVKLRCGLKNELADVDEPSRCEYIALLSTPTLCREEKLKELQHKLELMNKEQPQSHDEL* 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g00114 667 Coils Coil 173 249 - -
Eupl05g00114 667 Pfam Glucosidase II beta subunit-like protein 509 666 IPR036607 -
Eupl05g00114 667 MobiDBLite consensus disorder prediction 360 396 - -
Eupl05g00114 667 Pfam Glucosidase II beta subunit-like 65 192 IPR028146 -
Eupl05g00114 667 MobiDBLite consensus disorder prediction 420 436 - -
Eupl05g00114 667 MobiDBLite consensus disorder prediction 212 257 - -
Eupl05g00114 667 SUPERFAMILY Mannose 6-phosphate receptor domain 548 641 IPR009011 -
Eupl05g00114 667 MobiDBLite consensus disorder prediction 397 419 - -
Eupl05g00114 667 PANTHER N-LINKED OLIGOSACCHARIDE PROCESSING 25 667 IPR039794 -
Eupl05g00114 667 MobiDBLite consensus disorder prediction 212 437 - -
Eupl05g00114 667 ProSiteProfiles MRH domain profile. 548 643 IPR044865 -
Eupl05g00114 667 MobiDBLite consensus disorder prediction 323 340 - -
Eupl05g00114 667 Coils Coil 356 376 - -
Eupl05g00114 667 Gene3D - 543 641 IPR009011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g00114 Eupl-Chr5 2773711 2814125 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g00114 40 667 Calmodulin-binding Proteins AT5G56360 55.422 0.0 597