Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g00112 ATGTATAATCACCATAACCACCATCAAGGAAAGAACAGCTTCCCTTCTTCGAGGATGAGCATTCCTCCGGAAAGACACTTGTTCTTGCAAGGTGGAAATGCCCGTGGAGATACAGGACTGGTTCTCTCAACTGATGCTAAGCCTAGACTGAAATGGACAGCTGAGCTCCATGAGCGCTTCATAGAAGCAGTCAATCACCTTGGAGGGGCAGACAGTGAGTATATACAATGCAATCAGATTCAAGGAGTATTAAAGAAAATATATCCTGCAGCGATTCAGCTAATTCAAGATTTTCTATATGTTATAGAAGCTACTCCAAAGACAGTTATGAAACTCATGGGGATTCCAGGACTTACCTTATACCACCTAAAGAGTCATCTTCAGAAGTACAGGCTGAGTAAGAATCTACATGGACAAGCTAATACGGCAACCAACAAGAATGGTTGTATGGCCACGGTGGCAGGAGACAGGATTTCTGAAGTAAGTGGAGCACTTATGAGCAATACAAGCCTTGGGTCCCAGACGGACAAAAGCTTGCAGATAAGTGAAGCACTACAGATGCAAATCGAAGTGCAGAGAAGGCTACATGAACAGCTTGAGGTGCAGCGACACTTACAACTCCGGATAGAGGCTCAGGGAAAATACCTACAGTCAGTGCTGGAGAAGGCCCAGGAGACACTCGGAAGACAGAACCTAGGTTCTGTGGGACTTGAGGCTGCCAAAGTGCAGCTCTCTGAACTGGTCTCCAATCAACAAACACAAACAATCCAACCCGCAGATTGTTCAATGGACAGTTGCTTGACCTCATGCGAGGGATCTCAGAAGGACCAAGAGATACACAATATCGGGATGGGGTTGAGACCTTATCATGGTAATACACTCTTGGGCCCAAAAGAGATCGGAGAGGAGTCCAGGCTTGAGAAGACTGAACCCATATGGTGTGAAGACCTAAATGAGAATAAAATGTTTCCTTCCTCAATGGGAAGAGACACAGAGAGGATGATGTTCCCCGTACAAAGAAGCTCCAGTGATTTATCTAAGAGCATTAGAGTTCAAGGAGAAAAGAGAAGCGGTGGAAGCAGCATTTCTGATGCAAGACCAAAAGAAAGAGATGAGAATGACAATTTTCTCGACCAAACCAACACTAGAAGATCTGTGATTCAACTGGAGAATGAGGATAAGTCAAAAGGGTTTGGGCTGCCTTATCTAACAGCAAAACTGGACCTAAATGCCGATGATGAAAATGATGCTGCTACAAGCTGCAAACAGTTCGACTTGAATGGTTTCAGCTGGAGTTGA 1299 0.448 MYNHHNHHQGKNSFPSSRMSIPPERHLFLQGGNARGDTGLVLSTDAKPRLKWTAELHERFIEAVNHLGGADSEYIQCNQIQGVLKKIYPAAIQLIQDFLYVIEATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHGQANTATNKNGCMATVAGDRISEVSGALMSNTSLGSQTDKSLQISEALQMQIEVQRRLHEQLEVQRHLQLRIEAQGKYLQSVLEKAQETLGRQNLGSVGLEAAKVQLSELVSNQQTQTIQPADCSMDSCLTSCEGSQKDQEIHNIGMGLRPYHGNTLLGPKEIGEESRLEKTEPIWCEDLNENKMFPSSMGRDTERMMFPVQRSSSDLSKSIRVQGEKRSGGSSISDARPKERDENDNFLDQTNTRRSVIQLENEDKSKGFGLPYLTAKLDLNADDENDAATSCKQFDLNGFSWS* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g00112 432 Gene3D - 46 135 - -
Eupl05g00112 432 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 8 369 IPR044848 GO:0003700
Eupl05g00112 432 NCBIfam myb-like DNA-binding domain, SHAQKYF class 103 133 IPR006447 GO:0003677
Eupl05g00112 432 Coils Coil 182 202 - -
Eupl05g00112 432 MobiDBLite consensus disorder prediction 336 359 - -
Eupl05g00112 432 SUPERFAMILY Homeodomain-like 46 133 IPR009057 -
Eupl05g00112 432 MobiDBLite consensus disorder prediction 361 378 - -
Eupl05g00112 432 Pfam MYB-CC type transfactor, LHEQLE motif 179 226 IPR025756 -
Eupl05g00112 432 MobiDBLite consensus disorder prediction 336 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g00112 Eupl-Chr5 2736615 2739619 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g00112 110 432 G2-like Transcription Factor Family AT3G04030 48.696 1.47e-89 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Eupl05g00112 Myb_CC_LHEQLE 1.1e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g00112 - - ming:122061353 583.178