Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g00107 ATGGAAGATCAGGTCCCTGACCCCAACAGTCCTAGCCATGGCTCTGAAAGAACCGAGCCAGTGAGGTCAAGGTGGACCCCTAAGCCTGAGCAGATCGTGATACTGGAATCCATTTTCAACAGTGGAATGGTCAACCCACCCAAGGATGAAACTGTGAGGATAAGAAAATTGCTTGAGAAATTTGGCTCAGTTGGGGATGCCAATGTCTTCTATTGGTTTCAAAACAGACGGTCGCGCTCACGGCGTCGGCAACGCCAGATTCAAGCTGGCCTGGCTGGCGATCCACGCATTCCGATTCGAGCTACTGGTGCAATTCAATATGAACCCACTTCTTCTACTGGTGGATGTTTTGCTTCCTCTTCTTCTTTCCCTTCATCTGCACTTTCTCCTTGTCTTGTTGGATCTTCCTCTTCATCATCTTGTGGAGTTGTTAGTGATGATGGTGTTGATGATCTCTTCTCCATCTCTCATCAAATGGGTCTGCCGGAGATCGATCAAAGCCCCACTGTTAGTTCGATCTTGTGCCCTTCTGATACTTCGAATTTGCACTACCAACCTGGGATTATAACTGTATTTATCAATGGCGTTCCTACTGAGGTTCCAAGAGGGCCACTTGACACGAAAGCTATGTTTGGTCAAGCTGTAATGTTGGTTCATTCATCTGGAGTGCCAGTTCCAATCAATGAATATGGAATTTCATCACAGAGCTTGCAGCTGGGTGAAAGCTATTTCTTGGTAAATTTAGATTGCAGACATTTGCCCAAATTTGATTAG 774 0.4599 MEDQVPDPNSPSHGSERTEPVRSRWTPKPEQIVILESIFNSGMVNPPKDETVRIRKLLEKFGSVGDANVFYWFQNRRSRSRRRQRQIQAGLAGDPRIPIRATGAIQYEPTSSTGGCFASSSSFPSSALSPCLVGSSSSSSCGVVSDDGVDDLFSISHQMGLPEIDQSPTVSSILCPSDTSNLHYQPGIITVFINGVPTEVPRGPLDTKAMFGQAVMLVHSSGVPVPINEYGISSQSLQLGESYFLVNLDCRHLPKFD* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g00107 257 MobiDBLite consensus disorder prediction 1 26 - -
Eupl05g00107 257 Pfam Homeodomain 22 82 IPR001356 GO:0003677
Eupl05g00107 257 SMART HOX_1 20 87 IPR001356 GO:0003677
Eupl05g00107 257 PANTHER WUSCHEL-RELATED HOMEOBOX 11 1 247 IPR044558 GO:0003700|GO:0048830
Eupl05g00107 257 Gene3D - 20 89 - -
Eupl05g00107 257 ProSiteProfiles 'Homeobox' domain profile. 18 83 IPR001356 GO:0003677
Eupl05g00107 257 SUPERFAMILY Homeodomain-like 15 89 IPR009057 -
Eupl05g00107 257 FunFam WUSCHEL-related homeobox 11 22 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g00107 Eupl-Chr5 2432547 2434801 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g00107 8 246 Wox Gene Family AT3G03660 53.077 4.43e-70 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Eupl05g00107 Homeodomain 9.2e-13 CL0123