Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g00080 ATGGCAAATCCCCAATCATCCCTTCCACCAGGCTTTCGATTCCACCCAACAGATGAAGAACTCATCCTCCATTATCTAAGAAACAAGGGAACCTCCACCGGGTATCCAGTGTCCATCATCGCCGACGTTAATATCTACAAGTTTGATCCATGGGACTTACCAGCAAAAGCGGCGTTTGGCGAGAAAGAGTGGTACTTCTTCAGTCCTAGAGATCGAAAGTATCCCAACGGTGCAAGACCAAACCGATCGGCAGCGTCAGGATATTGGAAGGCAACTGGAACCGATAAACCGATACGAGCATCAAAAGGAGGGAACGATAGCATAGGTGTGAAAAAGGCTCTTGTGTTCTACATGGGTAGACCTCCAAAGGGTGTCAAGACGAATTGGATCATGCATGAATATCGCCTTGTAGACACTCACAAGAACAAGCCCATGAAGCCCAAAGATTCATCCATGAGGTTAGATGATTGGGTACTCTGCCGAATCTACAAGAAGTCCAACAGTCTCCAATCTGCAACAGAGATGGATCAAGAGCAAGAAGAACCTCCCATACAAGACTTTCTCCAACCAGTACTCTTGCCAAACACTTCCAACCAAAACACCTTCAAGCCCCAGAAATCGTCTTCCTTCTCCGACTTATTCGATGTCATGGACTACTCAATACTGACTCGTTTCCTGTCGGACAACCCGTCCGATTCGAATGTCTTCGACCTTTCTCCCATTCCAAGTTACTGCAATCCAGACCAATCTGTCTTCAATAACTACACTAACAAGAACAGCAACAGCAACAGCAACAGCAACAGCAGTAGTAGTTACTTAATTCAAAGACTCCCTCATATGGATTCTTCTTCTTCAGTCATGGAAAACCAGCTCAAGCGTCAGCATTCAATGGCAGCATTCACAGATGAGGATATGTTACACCCATCAAAGAAACTTAGCAATTCTTGCAGCTTCACCACCAACACTGATCAATTGGACACCCCTCAAAACCAATTTATCAAACAGCCATTCTTCAACCAGCATTTACTATTGAGTTCTCATCTCCAGTTCCAAAGATAG 1059 0.4495 MANPQSSLPPGFRFHPTDEELILHYLRNKGTSTGYPVSIIADVNIYKFDPWDLPAKAAFGEKEWYFFSPRDRKYPNGARPNRSAASGYWKATGTDKPIRASKGGNDSIGVKKALVFYMGRPPKGVKTNWIMHEYRLVDTHKNKPMKPKDSSMRLDDWVLCRIYKKSNSLQSATEMDQEQEEPPIQDFLQPVLLPNTSNQNTFKPQKSSSFSDLFDVMDYSILTRFLSDNPSDSNVFDLSPIPSYCNPDQSVFNNYTNKNSNSNSNSNSSSSYLIQRLPHMDSSSSVMENQLKRQHSMAAFTDEDMLHPSKKLSNSCSFTTNTDQLDTPQNQFIKQPFFNQHLLLSSHLQFQR* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g00080 352 MobiDBLite consensus disorder prediction 252 271 - -
Eupl05g00080 352 FunFam NAC transcription factor 56 17 170 - -
Eupl05g00080 352 ProSiteProfiles NAC domain profile. 8 165 IPR003441 GO:0003677|GO:0006355
Eupl05g00080 352 Gene3D NAC domain 17 170 IPR036093 GO:0003677|GO:0006355
Eupl05g00080 352 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 7 290 - -
Eupl05g00080 352 Pfam No apical meristem (NAM) protein 9 136 IPR003441 GO:0003677|GO:0006355
Eupl05g00080 352 SUPERFAMILY NAC domain 4 165 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g00080 Eupl-Chr5 1740061 1743955 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g00080 3 351 NAC Transcription Factor Family AT3G04070 51.247 7.10e-112 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Eupl05g00080 NAM 1.2e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g00080 - - tcc:18599957 400.208