Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g00079 ATGATGAGGAGGGAAAGAGACGCAGAAGCTGAGTTAAATCTACCACCCGGGTTCCGGTTCCACCCCTCCGACGAAGAGCTCGTCGTTCATTACCTTTGTCGCAAGGTCAGTTACCAATGTCTGCCCGTCCCGATCATCGCGGAAGTCGATCTCTACAAATACGATCCATGGCAACTTCCTGAGAAGGCTCTGTTTGGCATGAAAGAGTGGTACTTCTTCACCCCTAGAGACAGGAAATACCCGAATGGATCGAGGCCCAACAGGGCTGCTGGAAGTGGATACTGGAAAGCAACAGGTGCTGATAAACACATCAGAACAACAGGCAGTGGAAAGCATGTTGGAATAAAGAAGGCTCTGGTATTCTACTCAGGGAAAGCACCCAAAGGAATCAAGAGTAATTGGATCATGCACGAGTATCGGCTCGCTGAACCAAATCGGTCAGCCAACAAAAGTGGGAGTCTAAGGTTGGACGAATGGGTTCTTTGCCGGATTTACAACAAGAAGAACAATTGGGCGAAGATTCAAAACCAACAACAAGAACCATCTCTTGAAGAAACTACAGACTCCTTCGAGGCAGTTGATCAAGAATCGGATGTCGACAACGATTCACTTGCGGAGCTCAATTATCAGGGTGTGCCTCAACCTCAAGGCAATCCACCTCAAGCTCTAGACATTGAGCTACAAACAATGATGAAAGCGGAAGATAACGACTGGTTTACAGACTTGAATCTGGATGATTTGCAGAATTCTATTGCAGTATTTGGAGCGTCGCCTATACCGGATCTGAGTTACCAGGATCACTATATCTCAGGCCTATGGTCTCCACATTTGAAGCCTTACCAGCCCAACTTACTTCCATTTTGA 864 0.4699 MMRRERDAEAELNLPPGFRFHPSDEELVVHYLCRKVSYQCLPVPIIAEVDLYKYDPWQLPEKALFGMKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKHIRTTGSGKHVGIKKALVFYSGKAPKGIKSNWIMHEYRLAEPNRSANKSGSLRLDEWVLCRIYNKKNNWAKIQNQQQEPSLEETTDSFEAVDQESDVDNDSLAELNYQGVPQPQGNPPQALDIELQTMMKAEDNDWFTDLNLDDLQNSIAVFGASPIPDLSYQDHYISGLWSPHLKPYQPNLLPF* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g00079 287 FunFam NAC transcription factor 23 171 - -
Eupl05g00079 287 ProSiteProfiles NAC domain profile. 14 167 IPR003441 GO:0003677|GO:0006355
Eupl05g00079 287 Gene3D NAC domain 23 173 IPR036093 GO:0003677|GO:0006355
Eupl05g00079 287 SUPERFAMILY NAC domain 9 167 IPR036093 GO:0003677|GO:0006355
Eupl05g00079 287 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 203 - -
Eupl05g00079 287 Pfam No apical meristem (NAM) protein 15 141 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g00079 Eupl-Chr5 1718217 1719611 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g00079 9 275 NAC Transcription Factor Family AT5G08790 50.714 2.47e-85 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Eupl05g00079 NAM 6.2e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g00079 - - psom:113308752 428.328