Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g00063 ATGGTTTATTATATTGCCCGAAGACAAGACCTCAAAAGGAGGAGTGGTTCCAATGAAGATGATGGAAGGAAAAGTGTTCCACAAATGGGGTCTCCACTCCCTCATATCTTTGGGCTTCACAAAAATGTGGACCCTTCTCCAGCTTCAATGAGTTTTTCTCAAGATCATTTACTTTCTTCAGAAATGGGGTCTGTACACGAGCATGGAGGCACTTCATCAGTCACAAGCGGACCAGCAGAAGTAATCATTCCTGAGTCAACTACAAAAGATAAAGGGATGTCGTCTCCTCTATCTCTCTTCTCATCTTCAACTTCAACCCCTTCTAACCATCCACATCTGTCTGAGAATCCTGTTGTGCTCAAGGTCGGTTCTCCAGATAAATTGGCTGGGGATCTGCATCTCTTTGACGGTTCACCTATGTTCACAGCAGAGGAGCTTTCTCGGGCTCCAGCGGAAGTTATTGGTAGAAGTTGTCATGGCACATCCTATAAAGCTACACTCGACAGTGGTCATGAATTGGCTGTGAAATGGCTGAGGGAAGGAATAGCAAAAGGTAGGAAGGAGTTTGCAAGGGAAGCAAAGAAGCTTGGGAACATCAAACATCCAAATATAGTTTCTTTACGGGGTTATTATTGGGGTCCGAAAGAGCATGAAAAGCTGATTATATCAGATTACATCAGTGCTTCGTGTTTGGCCCTTTATCTTTATGAGACTGAGCCAAGAAAACTCCCAGCCTTATCTCTTGATCAACGGCTTAAGGTTGCCATAGATGTGGCCCGATGTCTAAGCTACCTGCATAATGAGAGAGCAATCCCTCACGGCAATCTCAAATCGACAAACATCTTATTAGGACTTCCTGACCTGAATGCTCTCCTTACCGATTACAGTCTCCACCGGATAATGACTCCAACAGGTACGGCCGAGCAGGTTCTAAATGCAGGTGCTCTTGGATACAGGCCACCAGAATTTGCCAGCTCAAGCAAGCCGTGCCCATCATTAAAGAGTGACGTCTATGCGTTTGGGGTGATCTTGCTGGAGCTCTTGACTGGAAAAAGTGCTGGCGAGATAGTTTCTGGTAATCCTGGGGTGGTTGATCTTACTGACTGGGTGAGGTTGTTGGCGGGTGAGAACCGTTCTATCGAGTGCTTCGACAGGCTGATTCCTGGCGTGGATAACGTCGAAGACCCTCCGAGAGGTCTGTGTGACATGCTACAGGTGGCTCTAAGGTGTATTCTTCCCGCATCTGAGAGACCGGATATGAGAACGGTCTTTGAAGAACTCTCCTCGATAGTTTTGTAA 1299 0.4642 MVYYIARRQDLKRRSGSNEDDGRKSVPQMGSPLPHIFGLHKNVDPSPASMSFSQDHLLSSEMGSVHEHGGTSSVTSGPAEVIIPESTTKDKGMSSPLSLFSSSTSTPSNHPHLSENPVVLKVGSPDKLAGDLHLFDGSPMFTAEELSRAPAEVIGRSCHGTSYKATLDSGHELAVKWLREGIAKGRKEFAREAKKLGNIKHPNIVSLRGYYWGPKEHEKLIISDYISASCLALYLYETEPRKLPALSLDQRLKVAIDVARCLSYLHNERAIPHGNLKSTNILLGLPDLNALLTDYSLHRIMTPTGTAEQVLNAGALGYRPPEFASSSKPCPSLKSDVYAFGVILLELLTGKSAGEIVSGNPGVVDLTDWVRLLAGENRSIECFDRLIPGVDNVEDPPRGLCDMLQVALRCILPASERPDMRTVFEELSSIVL* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g00063 432 PANTHER OS07G0626500 PROTEIN 2 430 - -
Eupl05g00063 432 MobiDBLite consensus disorder prediction 86 113 - -
Eupl05g00063 432 FunFam Pollen receptor-like kinase 1 226 432 - -
Eupl05g00063 432 FunFam Leucine-rich repeat receptor-like protein kinase 133 225 - -
Eupl05g00063 432 Gene3D Transferase(Phosphotransferase) domain 1 230 432 - -
Eupl05g00063 432 MobiDBLite consensus disorder prediction 8 42 - -
Eupl05g00063 432 SUPERFAMILY Protein kinase-like (PK-like) 151 427 IPR011009 -
Eupl05g00063 432 Pfam Protein tyrosine and serine/threonine kinase 152 353 IPR001245 GO:0004672|GO:0006468
Eupl05g00063 432 Gene3D Phosphorylase Kinase; domain 1 141 225 - -
Eupl05g00063 432 ProSiteProfiles Protein kinase domain profile. 148 432 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl05g00063 432 MobiDBLite consensus disorder prediction 86 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g00063 Eupl-Chr5 1339752 1342413 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g00063 127 430 Receptor kinase-like Gene Family AT3G51740 42.484 1.70e-64 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Eupl05g00063 PK_Tyr_Ser-Thr 1.2e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g00063 - - nnu:104587802 619.387