Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g00055 ATGGATCACTACAAGGTCCTGGGGTTGTCTCAGAACGCAACCAAGGAAGAAATCAAGGAAGCTTTCAGGAAATTGGCTCTGAAATTCCACCCGGACAAGCATTCGCAGTCCTCCAAGGCCGTCAGAGACGGTGCTACTCTCAGATTCAAGCAGGTCTCGGAGGCTTACGAGGTTCTTATCGATGATCGAAAGCGCATCGACTATAATCGGAGATTCGCCGGTGGTGGTGGTGGTGGTGGTGGTGGGTATGGTTATTATTATGGTAATTACAGAGGAAAGAATGAAAGTAATTACAAACCCAGATACAGACCCCCCTCTGCTTCCAATTGGGACAAATGGGGCTTCGATTTCGATGTCGCTCTTCGCTTTCTAACCAGGCGTAGCTTTCTTCTCAACCTTGCCTTCGCTAGTATCTTATTAGGTGGGGGAATTATCGTTGAAAGAAGCGGGGAAGCACTCTGGAAGATGCACAATTCTGGGAAATCGTTTGAAGAAGCTATGGAGTCAATTGAAAAGATCAAAACAGAGAAAGAGAGGTGA 540 0.4685 MDHYKVLGLSQNATKEEIKEAFRKLALKFHPDKHSQSSKAVRDGATLRFKQVSEAYEVLIDDRKRIDYNRRFAGGGGGGGGGYGYYYGNYRGKNESNYKPRYRPPSASNWDKWGFDFDVALRFLTRRSFLLNLAFASILLGGGIIVERSGEALWKMHNSGKSFEEAMESIEKIKTEKER* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g00055 179 CDD DnaJ 2 61 IPR001623 -
Eupl05g00055 179 PRINTS DnaJ domain signature 22 37 IPR001623 -
Eupl05g00055 179 PRINTS DnaJ domain signature 4 22 IPR001623 -
Eupl05g00055 179 PRINTS DnaJ domain signature 64 83 IPR001623 -
Eupl05g00055 179 PRINTS DnaJ domain signature 44 64 IPR001623 -
Eupl05g00055 179 SMART dnaj_3 1 64 IPR001623 -
Eupl05g00055 179 ProSitePatterns Nt-dnaJ domain signature. 49 68 IPR018253 -
Eupl05g00055 179 PANTHER CO-CHAPERONE PROTEIN DJLA 4 109 - -
Eupl05g00055 179 Gene3D DnaJ domain 1 109 IPR036869 -
Eupl05g00055 179 SUPERFAMILY Chaperone J-domain 1 89 IPR036869 -
Eupl05g00055 179 ProSiteProfiles dnaJ domain profile. 2 72 IPR001623 -
Eupl05g00055 179 FunFam DnaJ domain protein 1 75 - -
Eupl05g00055 179 Pfam DnaJ domain 2 69 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g00055 Eupl-Chr5 1172354 1176298 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g00055 3 69 C2H2 Transcription Factor Family AT1G74250 40.299 1.07e-10 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g00055 - - nnu:104613377 241.891