Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g00047 ATGCCGGAGTTGGGTTGGAGACACCACACGCTCATACAGGCTCTGTTATCACGCGGTGCTCTAAAGGAGGAGGAGTTCCACTCTATCTTCGCCGGCGTCACCGGAAAAAATCCAGGTAACCATCAGCAACTATTCAATGACTCTCTTCTTAAGATAAACAAGGAGCTCGCTTACGTGCAGTTTGAGTTGCGAGGCTGCAGAAACCAATACGATGGCAAGGTTTATTATGGTGTCGTCAATAATGTAGCTGACGAACAATCCAAGCTCGGAACGAAGTATTCAATTCCTCAGATTGCTTTCTACAAGGGTGTTTTAGAGGCAATTGTCCAAGATGTAACGGCTCAAGGCCGCATATCCAATATTGACGCTCTCAACATCCGCCTGGAGAATCAGGTTCAGACTGGAATAGGATCACAATCACAGGGGGGTCCATCTCAGATCCCTCCTGCATTCAAGAATTTCTCTATATCTCAGAAGGAGAAAACTCTCGATGACCTTGTGCGGGACCATTGGCTTTGCTCCACCCCAGATGGAAATATTGGACTTGGTGTCAGATCCTTCCTCGATCTTCGAAGTTGGTTTCGTAATAATGATGTTCCGTCATGTGACATTTGCAACGAGGCTGGAGTCAAGGCTGAGTTGTGCCAAAATGAGGGTTGTACTGTCCGAATTCACATCTACTGTCTAAAGAAGAAATTTTCTCAAAGAAGGGTTGAAAGAGTTTGTCCAGGTTGTGGCACTGAATGGCCATGTCTTGTGTCCACAACAGAAGCGGTAGAGGAAGAGGAAGAGGAACCGAATGAACCCACTCAAAGTCAAGCACATTCTTCAGGATCCGCCATGAGAAAGAGGGTTAAAAGTTGCAAAACCGAGGAGGCGGATACAGTTGGAGATGGTCCTTCTCGAGTAGCTGATCCAGATCTAAGGAGGACAACTCGAAGATCTGCGCGCCTAAGTTGGAGGAATCCAAGATGCAATGGGAAACTCCCACCAGGTTCAATGGGTCTGCCATTCCTTGGAGAGACCCTTCAGTTCTTCTCCCCCAACACATCTTATGATATTCCACCTTTTATCAGAGAGAGAATGGAAAGGTATGGGTCATTCTTCCGAACTAGTCTTGTTGGTCGGCCTGTTGTTGTATCGACCGATCCCGAGATCAACCATTTCATCTTTCAACAAGAAGGACGATTGTTTCAGAGCTGGTATATGGATAGCTTTACGGAGATTTTTGGACGACAAACTGTGCTCGCTGCACATAGCTTTGTTCATAAGTACCTCAGAAGCTTGGTTTTGAATGTATTTGGTCCAGAGAACTTGAAAGAAAAGCTTCTTCCTGAAGTCGAACAGACGACACGAAAATTTCTGCAGTTGTGGTCTAGTCAGGCCAGTGTGGAGTTAAAAGAAGGCATTTCAACTATGATTTTTGATTTGACTGCTAAGAAGATTAGTTATGAAGAAGATAAGTCATTGGCGAAGCTAAGGGAGAATTTTGTCGATTTCATTAAGGGTCTAATCTCCTTTCCTTTGAACATCCCTGGCACTGTTTATCATAAATGTTTACAGGGACGGAAGAAGGCGATGAAATTACTGAAGGATATGTTAGATGAGAGACGCTCATCACCCGAGATACGCCACAATGATCTCTTTGATCTCCTCATTGAAGAATTGAAAAAAGATGAGACAATCTTGACTGACGGGTTTGCTCTAGATTTAATGTTTGTTCTTCTCTTTGCTAGCTTCGAGACGACTTCCTCAGTTCTAACATTAGCCATGAAGTTTCTTTCAGATCACCCTTCAGTACTCCAAGAATTAACGATTGAGCATGAATCAATTATAAAAAGCCGGGAAAATGTCGATTCAAGAATCACATGGAACGAATATAAATCGATGAATTTTACATTTATGGTGAGTTCGATCGACAATCTTAATTTATTTTGTATGCAAATTGTAATTTGTTCAGGATATACAATTCCAGCAGGTTGGGCAGTTATGGTCTGTCCTCCTGCTGTTCATTTGAACCCAACTAAGTATGATGATCCTCTTGCCTTCAATCCCAGAAGATGGGAGGGCTTGGAATCAAATGCTGGTTCGAAGAATTTAATTGCGTTTGGTGGCGGCGCGAGATATTGTGTAGGAGCAGACTACTCGAAGTTGCAGATGGCCATCTTTTTCCATTGCTTGGTCACAAAGTACAGGTGGATAACAATCAAGGGCGGAGATATAATACGAAGACCTGGTTTAACGTTTCCAAATGGTTTTCACATTCAAATCTTGGAGAAATCATAA 2286 0.4326 MPELGWRHHTLIQALLSRGALKEEEFHSIFAGVTGKNPGNHQQLFNDSLLKINKELAYVQFELRGCRNQYDGKVYYGVVNNVADEQSKLGTKYSIPQIAFYKGVLEAIVQDVTAQGRISNIDALNIRLENQVQTGIGSQSQGGPSQIPPAFKNFSISQKEKTLDDLVRDHWLCSTPDGNIGLGVRSFLDLRSWFRNNDVPSCDICNEAGVKAELCQNEGCTVRIHIYCLKKKFSQRRVERVCPGCGTEWPCLVSTTEAVEEEEEEPNEPTQSQAHSSGSAMRKRVKSCKTEEADTVGDGPSRVADPDLRRTTRRSARLSWRNPRCNGKLPPGSMGLPFLGETLQFFSPNTSYDIPPFIRERMERYGSFFRTSLVGRPVVVSTDPEINHFIFQQEGRLFQSWYMDSFTEIFGRQTVLAAHSFVHKYLRSLVLNVFGPENLKEKLLPEVEQTTRKFLQLWSSQASVELKEGISTMIFDLTAKKISYEEDKSLAKLRENFVDFIKGLISFPLNIPGTVYHKCLQGRKKAMKLLKDMLDERRSSPEIRHNDLFDLLIEELKKDETILTDGFALDLMFVLLFASFETTSSVLTLAMKFLSDHPSVLQELTIEHESIIKSRENVDSRITWNEYKSMNFTFMVSSIDNLNLFCMQIVICSGYTIPAGWAVMVCPPAVHLNPTKYDDPLAFNPRRWEGLESNAGSKNLIAFGGGARYCVGADYSKLQMAIFFHCLVTKYRWITIKGGDIIRRPGLTFPNGFHIQILEKS* 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g00047 761 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 703 712 IPR017972 GO:0005506|GO:0016705
Eupl05g00047 761 PRINTS E-class P450 group I signature 587 613 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl05g00047 761 PRINTS E-class P450 group I signature 362 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl05g00047 761 PRINTS E-class P450 group I signature 567 584 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl05g00047 761 PRINTS E-class P450 group I signature 666 690 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl05g00047 761 PRINTS E-class P450 group I signature 710 733 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl05g00047 761 PRINTS E-class P450 group I signature 700 710 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl05g00047 761 MobiDBLite consensus disorder prediction 256 313 - -
Eupl05g00047 761 FunFam Cytochrome P450 family protein 321 759 - -
Eupl05g00047 761 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 201 257 IPR013083 -
Eupl05g00047 761 Gene3D - 84 198 IPR036388 -
Eupl05g00047 761 Pfam RING-like domain 202 245 IPR014857 -
Eupl05g00047 761 CDD CYP90-like 361 757 - -
Eupl05g00047 761 FunFam Non-structural maintenance of chromosomes element 1 201 257 - -
Eupl05g00047 761 CDD RING-CH-C4HC3_NSE1 200 249 IPR014857 -
Eupl05g00047 761 Gene3D - 5 81 - -
Eupl05g00047 761 SUPERFAMILY Cytochrome P450 320 749 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl05g00047 761 FunFam Non-structural maintenance of chromosomes element 1 5 81 - -
Eupl05g00047 761 Pfam Nse1 non-SMC component of SMC5-6 complex 8 190 IPR011513 GO:0006281|GO:0030915
Eupl05g00047 761 MobiDBLite consensus disorder prediction 284 313 - -
Eupl05g00047 761 PANTHER CYTOCHROME P450 26 328 734 - -
Eupl05g00047 761 Pfam Cytochrome P450 330 743 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl05g00047 761 Gene3D Cytochrome P450 321 757 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g00047 Eupl-Chr5 1034397 1046750 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g00047 319 760 Cytochrome P450 AT1G12740 60.175 0.0 580
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g00047 - - msin:131233322 654.055