Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g00038 ATGGACGCTGAAGTGATAGATGTGGAAGAGCAGAACCGTACAGCAGCAGGTGCAACAGATGATGAACCTCATGACGATGTAGAAGAGAGAACAACTGAACATTCCATAGAGGACATACCTCAAGACGAAGATGGGAATGGCGAACCACACGTGGGTATGGAGTTTGAATCTGAAGATGCTGCAAAAACGTTCTATGATGCATATGCAAGGCGTGTGGGTTTTAGCACTCGTGTTGGTCAATACAGCCGGTCGAAGCCTGACGGGACAGTGACTACTCGAGAGTTTGTATGTTCTAGAGAAGGTTTGAAAAGGAAGAATGTCGTCAGCTGCAATGCTATGCTTAAGATAGAGAGAAAGGATTCGGACAAATGGGTTGTGGCAAAATTTGTGAAGGAGCATAAGCACTCTACAGTGACTCCCAGTAAGGTGCATTACCTTAGACCTCGTAGGCATTTTGCTGGTGCATCAAAGACCATGGCGGAAGCTTACCATGGGATGGGGCTTGTCCCGAGTGGTATTATGTATGTGTCCATGGATGGAAATCGTGTCTCTGTAGAAACAAATCGTCCTGTTAGGAATGTTCCACATGTAGAAACAAATCGCCCAGTTAGGAATGCTGGGCCCATAAGTTATGCTAGATCTTCTAACCGTAAGAAGACTCTTGGAAGAGATGCTCAGAATCTACTGGACTATTTCAAGAAGATGCAGGGCGAGAACCCTGGCTTCTTTTATGCAATACAACTTGATGAAGATAACCGCATGACTAATGTTTTTTGGGCAGATGCAAGGTCAAGGACGGCTTACACTCACTTTGGTGATGCAGTTACCTTTGACACTATGTACAGGCCAAACCAGTATCGGGTACCGTTTGCTCCATTCACAGGAGTAAACCATCACGGGCAGATGGTGTTGTTTGGTTGCGCTCTGATTTTAGATGAGTCCGAGTCTTCCTTTATTTGGTTGTTTAAGACATGGCTTGAAGCGATGTCTGGTCGCCCTCCTGTCTCTATAACCACTGACCAAGACAGGGCTATACAGGCAGCAGTTGCTCATGTGTTCCCAGAAACCCGCCACCGCATTTGCAAGTGGCACATCTTAAGAGAAGGCCAGGAAAGATTAATTCATGTATGTCATGCTCATCCTTCTTTCCAAGGAGAACTTTATAATTGCATCAACTTGACTGAAACAATCGAGGATTTTGAAACATCTTGGGGCTCTCTCCTTGATAGATACGATCTCATGAAAAATGATTGGCTTCAAGCGTTGTATAACGCTCGCCAACATTGGGTCCCAGTGTATTTTCGGGACACGTTCTTTGCTGCATTTTCTTCAAACCAAGGAGTTGAAACTATTAGCACATTTTTTGATGGATATGTGAATCAACAGACTACTTTACCTTTGTTCTTTAAGCAGTATGAAAGAGCTTTAGAAAATTGGTTTGAAAAGGAAATTGAAGCGGATTTTGATACAATTTGCACCACACCAGTACTGAAGACGCCCTCGCCCATGGAGAAACAGGCAGCAAACCTTTACACCAGAAAAATATTTGCGAAATTTCAAGAGGAATTAGTTGAAACTTTTGTGTATACTGCAAATAAAATTGAGGGGGATGGGGCAATCAGCACATACAGGGTTGCAAAGTTTGAGGATGACCACACAGCATATATCGTCACATTGAATGTTCCTGAAATGAGAGCAAGCTGCAGCTGCCAGATGTTTGAGTTCTCAGGTATTCTATGTAGGCATATATTGACGGTCTTCACTGTAACAAATGTCCTTACGCTGCCATCTCATTACATCTTGAAGCGGTGGACAAGAAATGCCAAGAGCACGGTTGGATCAGATGAGCGCAGTGGAGAACTGCATGGTCAAGAATCTCTGACCATGCGATACAACAATCTATGCCGGGAAGCCATTAAGTATGCTGAGGAAGGGGCAATAGCTACAGAGACCTATAATGTTGCAATTAGTGCTCTAAGAGAGGGTGGGAAGAAGGTTGCTGTTGTGAAAAAAAGTGTTGCAAGAGTTGCACCTCATAGCTCTCAGATTAGTGGAAATAATCAGGAAGACATCAACAGGAAGACCCCTATGTCGGCTTCGGATATGACCCCATCATTGTGGCCTCGGCAAGATGAAGTGACCCGCCGCTTTAATCTTAATGATGCTGGCGCTCCTACACCACCTGTTTCTGATTTGAATCTGCCCCGCATGGCGCCCGTGTCTCTTCATCAGGATGATGGCACTCCCGATAATATGGTGGTGCTGCCTTGCCTTAAGTCAATGACTTGGGTCATGGAGAACAAGAATTCAACACCGGCTAATAGAGTAGCTGTCATCAATCTGAAGCTGCAAGATTATAGCAAGAATCCTTCAGGAGAATCAGAGGTGAAGTTTCAGCTTTCCAGGGTCACATTGGAGCCCATGTTGAGATCTATGGCCTACATCAGTGAGCAACTCTCCACACCGGCCAATAGAGTGGCTGTTATTAATCTGAAGCTCCAAGATACTGAGACAATTACAGGAGAAACAGAGGTAAAATTTCAGGTGTCTAGAGATACACTGGGTGCCATGTTGAGATCAATGGCTTATATACGTGAACAGCTCTCAAACCTTGCTGAACCCCAATCAGAGCAATCCTCGAAGAAGCAACGGCAGTAG 2658 0.447 MDAEVIDVEEQNRTAAGATDDEPHDDVEERTTEHSIEDIPQDEDGNGEPHVGMEFESEDAAKTFYDAYARRVGFSTRVGQYSRSKPDGTVTTREFVCSREGLKRKNVVSCNAMLKIERKDSDKWVVAKFVKEHKHSTVTPSKVHYLRPRRHFAGASKTMAEAYHGMGLVPSGIMYVSMDGNRVSVETNRPVRNVPHVETNRPVRNAGPISYARSSNRKKTLGRDAQNLLDYFKKMQGENPGFFYAIQLDEDNRMTNVFWADARSRTAYTHFGDAVTFDTMYRPNQYRVPFAPFTGVNHHGQMVLFGCALILDESESSFIWLFKTWLEAMSGRPPVSITTDQDRAIQAAVAHVFPETRHRICKWHILREGQERLIHVCHAHPSFQGELYNCINLTETIEDFETSWGSLLDRYDLMKNDWLQALYNARQHWVPVYFRDTFFAAFSSNQGVETISTFFDGYVNQQTTLPLFFKQYERALENWFEKEIEADFDTICTTPVLKTPSPMEKQAANLYTRKIFAKFQEELVETFVYTANKIEGDGAISTYRVAKFEDDHTAYIVTLNVPEMRASCSCQMFEFSGILCRHILTVFTVTNVLTLPSHYILKRWTRNAKSTVGSDERSGELHGQESLTMRYNNLCREAIKYAEEGAIATETYNVAISALREGGKKVAVVKKSVARVAPHSSQISGNNQEDINRKTPMSASDMTPSLWPRQDEVTRRFNLNDAGAPTPPVSDLNLPRMAPVSLHQDDGTPDNMVVLPCLKSMTWVMENKNSTPANRVAVINLKLQDYSKNPSGESEVKFQLSRVTLEPMLRSMAYISEQLSTPANRVAVINLKLQDTETITGETEVKFQVSRDTLGAMLRSMAYIREQLSNLAEPQSEQSSKKQRQ* 886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g00038 885 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 35 667 IPR031052 GO:0006355
Eupl05g00038 885 MobiDBLite consensus disorder prediction 1 52 - -
Eupl05g00038 885 MobiDBLite consensus disorder prediction 679 705 - -
Eupl05g00038 885 Pfam MULE transposase domain 275 367 IPR018289 -
Eupl05g00038 885 Pfam SWIM zinc finger 555 589 IPR007527 GO:0008270
Eupl05g00038 885 ProSiteProfiles Zinc finger SWIM-type profile. 555 591 IPR007527 GO:0008270
Eupl05g00038 885 Pfam FAR1 DNA-binding domain 63 138 IPR004330 -
Eupl05g00038 885 SMART 26again6 566 593 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g00038 Eupl-Chr5 820557 830974 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Eupl05g00038 MULE 5.1e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g00038 - - nnu:104593470 1486.86