Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g00015 ATGCTGGTTTACGAGTACATGGCCGGTGGCAACCTTTCCCGCGCTATATATCACGGAGATCTGACGTGGCACCAACGACTAAAGATTGCCGTAGAAATCTCGGAGGGATTAGTTTATTTGCACGAGCTGTCGGAAGGAGCCGTCGTTCATCGGGACGTCAAACCCACAAATATACTCCTCAACGATTCGGGACAGGCGAAGTTGTCCGATTTCGGGGTGTCAAGAATATTGCCCTCAGAAATCACCCACGTGTCGACAGAGATTAAGGGGACGATTGGATATCTAGATCCGGAGTGCTTCTACGTAGGGCACGTGTCAGAGGCAACGGACGTGTACAGCTTCGGGATCGTTCTCCTAGAGCTTATCACCGGGAAAAAAGCAGTAGTGAGCACGCCATCAGGCGGAGCGGAATCCATCGTGTACAGCGCCCACGCACTGATGAGTGGCAGCGAGGAGCCAGAGGTTCAGAAGATCGCTGACCCAAGGCTCGAACCGGGGCTCGACCCCAGCTCCATGGTGGAAGTGTTTAAAATCGCTTATAAATGCGTGAAGCCGTACAAGAATGAGAGGCCGAACATGAAGGAGGTATTGGAGGTCCTGAAGACGGCGTTAGCGGGGATCCAAGCAGTGGCGCCACTTCCTCCGGTGGACGTCGTAAGCGATGAGATATCAGTACAGTCCACTTCGCGGGCATCGACGCCGTCGGTAAACTTGTGGTCGTTGTGA 726 0.5372 MLVYEYMAGGNLSRAIYHGDLTWHQRLKIAVEISEGLVYLHELSEGAVVHRDVKPTNILLNDSGQAKLSDFGVSRILPSEITHVSTEIKGTIGYLDPECFYVGHVSEATDVYSFGIVLLELITGKKAVVSTPSGGAESIVYSAHALMSGSEEPEVQKIADPRLEPGLDPSSMVEVFKIAYKCVKPYKNERPNMKEVLEVLKTALAGIQAVAPLPPVDVVSDEISVQSTSRASTPSVNLWSL* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g00015 241 ProSiteProfiles Protein kinase domain profile. 1 204 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl05g00015 241 Gene3D Transferase(Phosphotransferase) domain 1 7 210 - -
Eupl05g00015 241 ProSitePatterns Serine/Threonine protein kinases active-site signature. 48 60 IPR008271 GO:0004672|GO:0006468
Eupl05g00015 241 FunFam Lectin-domain containing receptor kinase A4.3 7 218 - -
Eupl05g00015 241 SMART serkin_6 2 205 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl05g00015 241 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 221 - -
Eupl05g00015 241 PIRSF ILK 1 209 - -
Eupl05g00015 241 SUPERFAMILY Protein kinase-like (PK-like) 1 200 IPR011009 -
Eupl05g00015 241 Pfam Protein kinase domain 2 198 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g00015 Eupl-Chr5 212632 213357 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g00015 2 212 Receptor kinase-like Gene Family AT4G29180 40.465 7.98e-49 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Eupl05g00015 Pkinase 1.6e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g00015 - - nnu:104612951 358.221