Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g02220 ATGATGGGAGAGGAGTTGGGTTCGAGTTCATCGGCCATCGGTTCTTCAAACATAGGGTTTCAGCTTTTAAAGAAGTGCGGATGGAAAGAAGGAACCGGTCTTGGTGTTGCAGAGCAGGGAAGGTTGGAGCCGTTACAGGCACAGGTGAAGAATAACAAGCGTGGTCTGGGATTGGAGAAAATAAAGAAGAAAACCCCGCAGCTCCCTGAAGATCCTGTCTCTAGAGTGCAAAATGACAATGAACACACTCAATCTAGAAAGAAAACCAAGACATACTCCAAAAGGGTGAGGAAGATGCAGGAGGAAGAAAAGCGCTTGCAAGAGAAGGAATTTGAACAAGCCTTCTTCAGGGAGTTCTGGCCAGATAATGTTTGA 375 0.4613 MMGEELGSSSSAIGSSNIGFQLLKKCGWKEGTGLGVAEQGRLEPLQAQVKNNKRGLGLEKIKKKTPQLPEDPVSRVQNDNEHTQSRKKTKTYSKRVRKMQEEEKRLQEKEFEQAFFREFWPDNV* 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g02220 124 Coils Coil 89 109 - -
Eupl04g02220 124 MobiDBLite consensus disorder prediction 51 98 - -
Eupl04g02220 124 MobiDBLite consensus disorder prediction 55 87 - -
Eupl04g02220 124 SMART G-patch_5 13 59 IPR000467 GO:0003676
Eupl04g02220 124 Pfam G-patch domain 16 59 IPR000467 GO:0003676
Eupl04g02220 124 ProSiteProfiles G-patch domain profile. 15 61 IPR000467 GO:0003676
Eupl04g02220 124 PANTHER BAT4 PROTEIN-RELATED 7 124 IPR039146 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g02220 Eupl-Chr4 52779677 52785909 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g02220 5 57 C2H2 Transcription Factor Family AT5G26610 49.057 6.03e-10 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g02220 - - ming:122088172 182.956