Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g02219 ATGTGTTCAGACCTTATTTTGAGTTCCAAAAAGAGCCGAAGAATTGCTTTTCAGGCAAAAACATTTGCCCTTTGGCCTTATACATATAGAGAGCGCCGTCCGCGTAGGCAACAGCCAAAAAATTCTTTAAACTTTTTTTCTATTTATTTCGCTCTTCTTCTCCTTTTTCAAAATCTGTCTCTCGTCGCCCTTTGCGTCTCCGTCATGGATCTGGATCTGTGGATTTCAAAGGTTAAAGAAGGCCAGCATTTATTGGAAGACGAGCTCCAGCTTCTTTGCGAACACGTGAAAGAGATCCTCATTGAGGAGTCAAATGTGCAGCCTGTCCATAGTCCAGTCACTGTTTGTGGCGACATCCACGGACAGTTTCATGATCTAATGAAACTCTTCCAAACAGGAGGTCATGTACCAGAGACAAATTACATTTTTATGGGTGATTTTGTTGATCGTGGATACAACAGTCTCGAAGTTTTCACAATTCTTTTGCTTCTTAAAGCAAGATACCCTGCTAACATAACTCTTTTGCGTGGCAATCACGAAAGCAGGCAACTAACTCAGGTCTATGGTTTTTATGATGAATGCCAGAGGAAGTATGGAAATGCTAATGCATGGCGGTATTGCACTGATGTTTTTGACTACCTCACACTATCGGCAATTATAGATGGAACTGTGCTGTGCGTCCATGGTGGTCTTTCTCCTGACGTCCGAACAATTGACCAGATGAGGGTCATTGAACGAAATTGTGAAATTCCCCATGAAGGGCCCTTCTGTGATCTCATGTGGAGTGACCCTGAAGAGATCGAAACATGGGCAGTCAGCCCACGGGGCGCAGGTTGGCTTTTTGGATCTAGGGTCACGTCTGAGTTCAATCACATAAACAATCTGGATCTGGTTTGTCGGGCCCACCAGCTTGTACAGGAAGGTCTCAAATACATGTTTCAAGATAAAGGCCTCGTAACTGTGTGGTCTGCACCAAATTATTGTTATCGATGTGGAAATGTAGCATCTATATTGAGCTTCAATGAGAATATGGAGAGAGAAGTGAAGTACTTCACAGAAACGGAGGAGAACAACCAGATGAGAGGGCCGAGGACAGGAGTCCCTTATTTCTTGTGA 1116 0.4373 MCSDLILSSKKSRRIAFQAKTFALWPYTYRERRPRRQQPKNSLNFFSIYFALLLLFQNLSLVALCVSVMDLDLWISKVKEGQHLLEDELQLLCEHVKEILIEESNVQPVHSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDVRTIDQMRVIERNCEIPHEGPFCDLMWSDPEEIETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYCYRCGNVASILSFNENMEREVKYFTETEENNQMRGPRTGVPYFL* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g02219 371 Gene3D - 63 371 IPR029052 -
Eupl04g02219 371 CDD MPP_PP2A_PP4_PP6 70 353 - -
Eupl04g02219 371 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED 70 371 IPR047129 GO:0004722
Eupl04g02219 371 SUPERFAMILY Metallo-dependent phosphatases 50 354 IPR029052 -
Eupl04g02219 371 PRINTS Serine/threonine phosphatase family signature 294 314 IPR006186 GO:0016787
Eupl04g02219 371 PRINTS Serine/threonine phosphatase family signature 174 198 IPR006186 GO:0016787
Eupl04g02219 371 PRINTS Serine/threonine phosphatase family signature 238 265 IPR006186 GO:0016787
Eupl04g02219 371 PRINTS Serine/threonine phosphatase family signature 317 333 IPR006186 GO:0016787
Eupl04g02219 371 PRINTS Serine/threonine phosphatase family signature 112 139 IPR006186 GO:0016787
Eupl04g02219 371 PRINTS Serine/threonine phosphatase family signature 141 168 IPR006186 GO:0016787
Eupl04g02219 371 PRINTS Serine/threonine phosphatase family signature 209 235 IPR006186 GO:0016787
Eupl04g02219 371 FunFam Serine/threonine-protein phosphatase 69 371 - -
Eupl04g02219 371 ProSitePatterns Serine/threonine specific protein phosphatases signature. 175 180 IPR006186 GO:0016787
Eupl04g02219 371 SMART pp2a_7 84 355 IPR006186 GO:0016787
Eupl04g02219 371 Pfam Calcineurin-like phosphoesterase 112 303 IPR004843 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g02219 Eupl-Chr4 52763268 52777945 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g02219 111 289 Calmodulin-binding Proteins AT5G63870 37.500 5.70e-29 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g02219 K15498 - cave:132183581 630.172