Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g02214 ATGTCCTCCATCACCTGCAAAGCTGCGGTTGCTTGGGGACCTGGAGAAGCTCTGGTGTTGGAGGATGTGGAGGTTGATCCACCGAAACCGATGGAAATTCGTATAAAGATCGTCTGCACTTCGCTCTGTCGGAGCGATGTCACACAGTGGGAATCCAAGGCACATGCTCCTCTATTTCCTCGAATTTTTGGCCACGAAGCATCAGGGATTGTTGAGAGCATAGGAGAAGGAGTAACTGAGTTTAAAGAGGGTGACCATGTGCTTACAGTATTCACTGGAGAATGCATGACATGCAAACATTGCTCCTCTGGCAAAAGTAATATGTGCCAGGTATTGGGGTTGGAAAGGAGAGGTGTAATGCATAGTGATCAGAAGACCCGCTTCTCAATAAAAGGGAAGCCTGTTTATCATTATTGTGCTGTTTCAAGTTTTTCTGAATACACAGTAGTGCATTCTGGATGTGCTGTTAAAATAAGCTCAACTGTGCCGCTGGAGAAAATATGCTTGCTTAGTTGTGGAGTTGCTGCAGGTCTTGGTGCGGCTTGGAAGGTTGCTGATATATCTAAAGGATCAAATGTAGTTATTTTTGGTCTCGGAACTGTGGGCCTTTCCGTAGCACAAGGTGCCAAACTAAGGGGTGCATCTCGAATAATTGGTGTGGATACTAATCCTGAAAAGTATGAAAAAGGGAAGGCTTTTGGGGTTACAGAATTTATCAACCCAGATGATTGTAATGAACCCGTTCAACAGGTTATCAAGCGTATTACTGATGGAGGGGCAGATTATTCTTTTGAGTGTATTGGTGACACCGGAATGATAACTACTGCATTACAGTCGTGTTGTGATGGTTGGGGTGTGACAGTTACTCTTGGTGTACCAAAAGTGAAGCCAGAGATCACGGCTCATTATGCATTACTTCTATCAGGAAGAACATTGAGAGGTTCTCTATTCGGAGGGTGGAAACCTAAATCTGATCTTCCATTGCTAGTAGATATGTATTTGAAAAAGGAAATTCAAATCGATGAGTTCGTCACGCATAATCTGCCATTTGAGGATATCAACAAAGCCTTCGACCTGATGAGAGAAGGGAAGTGTTTGCGGTGTGTGATCCACATGCCAAAGTAA 1125 0.4391 MSSITCKAAVAWGPGEALVLEDVEVDPPKPMEIRIKIVCTSLCRSDVTQWESKAHAPLFPRIFGHEASGIVESIGEGVTEFKEGDHVLTVFTGECMTCKHCSSGKSNMCQVLGLERRGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKISSTVPLEKICLLSCGVAAGLGAAWKVADISKGSNVVIFGLGTVGLSVAQGAKLRGASRIIGVDTNPEKYEKGKAFGVTEFINPDDCNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGVTVTLGVPKVKPEITAHYALLLSGRTLRGSLFGGWKPKSDLPLLVDMYLKKEIQIDEFVTHNLPFEDINKAFDLMREGKCLRCVIHMPK* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g02214 374 Gene3D - 177 315 - -
Eupl04g02214 374 SUPERFAMILY GroES-like 325 371 IPR011032 -
Eupl04g02214 374 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 162 336 IPR036291 -
Eupl04g02214 374 Gene3D - 9 367 - -
Eupl04g02214 374 PANTHER ALCOHOL DEHYDROGENASE 3 370 - -
Eupl04g02214 374 SUPERFAMILY GroES-like 3 183 IPR011032 -
Eupl04g02214 374 CDD alcohol_DH_plants 4 371 - -
Eupl04g02214 374 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 64 78 IPR002328 GO:0008270|GO:0016491
Eupl04g02214 374 FunFam S-(hydroxymethyl)glutathione dehydrogenase 177 315 - -
Eupl04g02214 374 Pfam Alcohol dehydrogenase GroES-like domain 31 157 IPR013154 -
Eupl04g02214 374 Pfam Zinc-binding dehydrogenase 201 326 IPR013149 -
Eupl04g02214 374 FunFam Alcohol dehydrogenase 6 9 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g02214 Eupl-Chr4 52724040 52736346 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g02214 32 172 Monolignol Biosynthesis Gene Families AT4G37970 29.577 1.87e-11 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g02214 K00001 - nnu:104591592 709.523