Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g02197 ATGTTACCGAGCTCAGGTCACAGTAACGGCTACCAGCAAAACGGTCCTTCGGTGAAGCGACTCGGGCTGAGTCAGAGGGAGCGATTCCGAAGGGGGAGCCGTAGCTCGAGGGATTTGAGAGGTGGTGGGCATGGGTTTAGGGCTTCTGAGCAGGAGAGGCCTCGTTGTACGGAGTTCGATATGGCCTATTTTCAGTCGTATTCTCATGTTGGAATTCACGAAGAGATGATCAAGGATCGTGTGCGGACTGAAACTTATAGGGCCGCTATCATGGAGCATCAAAATTCTATTGCAGGCAAAGTTGTAGTGGATGTTGGCTGTGGCACAGGCATTCTTTCTATATTTTGTGCTCTTGCTGGCGCAAAGCGGGTGTATGCAGTGGATGCCAGTGAGATTGCAGTTCAG 405 0.5111 MLPSSGHSNGYQQNGPSVKRLGLSQRERFRRGSRSSRDLRGGGHGFRASEQERPRCTEFDMAYFQSYSHVGIHEEMIKDRVRTETYRAAIMEHQNSIAGKVVVDVGCGTGILSIFCALAGAKRVYAVDASEIAVQ 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g02197 135 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 60 135 IPR025799 GO:0016274|GO:0018216
Eupl04g02197 135 MobiDBLite consensus disorder prediction 1 20 - -
Eupl04g02197 135 MobiDBLite consensus disorder prediction 1 52 - -
Eupl04g02197 135 CDD AdoMet_MTases 102 135 - -
Eupl04g02197 135 Pfam Ribosomal protein L11 methyltransferase (PrmA) 98 135 - -
Eupl04g02197 135 Gene3D Vaccinia Virus protein VP39 43 135 IPR029063 -
Eupl04g02197 135 MobiDBLite consensus disorder prediction 23 52 - -
Eupl04g02197 135 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 43 134 IPR025799 GO:0016274|GO:0018216
Eupl04g02197 135 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 66 134 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g02197 Eupl-Chr4 52436434 52457633 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g02197 63 131 C2H2 Transcription Factor Family AT3G12270 62.319 1.47e-23 93.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g02197 K11437 - nnu:104613390 212.231