Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g02186 ATGGCATCCGCTGAAACACATTCGACGGGATCACACCCCTCTTCTGAGAAAATGCCGCGGAAGCCAACCTTGAATGCCAGGGTTCCACCTTCCCTACAGTCAATACGATCGTTGCCTGTTGATTTTAGGTTTACTGGATCACCTTCTTCTCATTCCACTGAATTGTCCGATGCTATTAATACAGACAATAATCATACAAATTCATGTAGTATCATTCCTGAAAGTGATGATTTAGTCGGTGAGGTTTTCGAGGGCCTTGAGGATACTGTTAGCAACATGGAGCCAACTAATGATGACTCACCGTATAGTAAGAAAACCATCTCTGTTGAAGAGAGGCCTTCTGAAGGGGATGAATACTTGGATTTGATGACTTCTCCTCTGCCTGTGCTCTCGCCATCCCGTACTGAATTCAGGTGGAGTGACACTAGCTCCTTTGCCGCTAAAAAGAAACTTCAGTCTTGGTGTCAACTTCCAAATGGCAACTGGGCTTTGGGGAAGATAATGTCAACTTCAGGGAATGAGTCAGATATTTCACTTGCAGAAGGGAAAGTTTTAACGGTGAATACTGAATGTCTATTACCTGCGAACCCTGATATCCTTGATGGTGTAGATGATCTCATGCAGCTTAGTTATTTAAATGAACCATCAGTAGTGTACAATCTTCAATATCGATACAATCAAGATATGATCTATACTAAAGCCGGACCAGTGTTGGTTGCCATCAATCCCTTTAAGGAAGTCCCTTTGTATAGAAATGATTACATTGAAGCATATAGGCGTAAATCTATGGAGAGCCCACATGTGTATGCCATCACAGATACAGCCATCAGGGAGATGATACGAGATGAAGTCAACCAATCTATCATTATAAGCGGTGAAAGTGGAGCAGGAAAAACTGAAACAGCAAAGATAGCAATGCAATATTTAGCTGCACTTGGAGGGGGTAGTGGAATAGAATATGAAATATTGAAGACTAATCCGATTTTGGAAGCATTTGGTAATGCGAAAACATCAAGAAATGACAACTCAAGTCGTTTTGGGAAGCTGATCGAAATTCACTTTAGCGAAGCTGGAAAAATTTCTGGTGCAAAGATTCAAACTTTTCTACTTGAAAAGTCAAGAGTGGTCCAATGTGCAGAGGGAGAAAGATCATACCATATATTTTATCAGCTCTGTGTTGGGGCTCCTCCAGCTCTTAGAGAGAAATTGAATTTGAAGAATGCAAATGAATATAAATATTTGAAACAGAGCAATTGCTATTCTATTGCTGGGGTTGATGATGCTGAACGGTTCCGCCTTGTTATGGAAGCTCTGGATATTGTTCATGTTAGCAAAGAGGATCAAGATAGTGTGTTTGCAATGCTTGCTGCAGTTTTGTGGTTGGGTAACATCTCCTTTACTGTGATTGATAATGAAAACCATGTTGAAGCTGTGTCAGATGAAGGTCTAAAAAACGTTGCTAAATTGATTGGATGTGATGTTGGGGAGCTGAAGCTAGCTTTGTCAACTCGCAAAATGAGAGTTGGCAATGATAATATTGTCCAGAAGCTTACATTATCACAGGCTATTGACACAAGGGATGCTTTGGCCAAATCACTCTATGCTTGTTTGTTTGAGTGGCTGGTGGAACAAATCAACAAGTCACTGGAAGTAGGCAAGCGGCGTACAGGCAGATCCATTGGCATTCTGGATATCTATGGCTTCGAATCTTTTGATAGGAATAGTTTTGAGCAGTTCTGCATAAATTATGCAAACGAGAGATTGCAGCAACACTTTAATCGCCATTTATTCAAGCTAGAGCAGGAGGAATATATCCAAGATGGAATAGACTGGGCAAAAGTTGATTTTGAAGACAACCAAGATTGTCTGAATCTTTTTGAGAAGAAACCATTGGGGCTACTGTCTCTGTTGGATGAGGAGTCCACTTTCCCAAATGGCACTGACTTGACATTTGCCAACAAGCTAAAGCAGCACTTGAATTCTAATTCTTCTTTCAGAGGAGAACGGGGCAAAGCTTTCAGTGTCTGCCATTATGCAGGGGAGGTTACATATGACACTACCGGTTTTTTGGAGAAGAACAGGGATCTATTGCACTTAGATTCTATTCAACTTCTGTCTTCTTGCACATGCCAACTTCCTCAGATATTTGCATCCAATATGCTTGCTCAATCTGAGAAGCCAGTAGTGGGCCCTTCATATAGATCAGGTGGAGCAGATTCCCAAAAGCTAAGTGTTGCAACAAAGTTTAAGGGTCAACTGTTCCAATTAATGCAACGGCTGGAGAACACAACGCCACACTTCATACGTTGTATCAAGCCCAACAATTTGCAACGTCCAGGAACCTATGACCAACAACTTGTATTGCAGCAGCTAAGATGTTGTGGAGTGCTAGAGGTGGTCCGAATATCGAGGTCTGGCTATCCTACCAGGATGTCTCACCAAAAGTTCGCGAGAAGGTATGGTTTTCTTCTGGAGAGTGTTGCATCCCATGATCCACTTAGTGTTTCAGTTGCAATTCTTCACCAGTTCAACATTCTGCCAGAGATGTATCAAGTTGGCTACACAAAATTGTTTTTCCGAACTGGACAGATTGGTGTGCTTGAGGATACGCGAAACCGTACCCTCCATGGCATTTTACGAGTGCAGAGCTGTTTCAGAGGTCACAAGGCTCGCTCTTATCTCAAAGAGCTTAGGAGAGGAATTGCCACACTACAGTCATTTGTTCGCGGTGAGAAAACCAGAAAGGAATATGCCGTCTTAGTACAGAGACATAGAGCTGCTGTGGTTATACAGAGGCAGATAAAAGGCATGGTTGCTAGGAAAACTTTTGTGAATGTTCGTGATGCATCAATACTAATACAGTCAGTTATTCGTGGCTGGTTAGTCAGAAGGTGTTCCGGAGATGTAGGCTTACTGACCTCAACCAAAAAATTGGAAGGCGCAAAGGGTTCTGAGCCAGATCAAGTGCTGGTGAAGGCATCAGTCCTCGCAGAACTACAGCGCAGAGTCCTAAAAGCAGAGGCTGCTTTGAGAGAGAAAGAAGAGGAGAATGATATCCTCCACCAACGGATCCATCAATATGAGAGCCGGTGGTCCGAGTACGAGCTGAAGATGAAGTCCATGGAAGAAGTATGGCAGAAACAGATGAGATCCCTACAGTCTAGCCTCTCAGTAGCAAAGAAGAGCCTAGCCATTGATGATGCTGAGAGAAAGTCTGATGCCTCAGTAAATGTGACCGATGACAGAGACTACAGTTGGGATATTGGGAGTAATAATTACAAGGGCCGGGAAAACAATGGGGTAAGACCTGGGTCGCGAGTTATGGACAGAGAGATGAGTGCTGGCCTAAGTGTCATTAGTCGAATGGCTGAGGAGTTCGAACAACGGAGTCAGGTATTTGGTGATGATGCCAAGTTCTTGGTGGAGGTGAAGTCGGGGCAGGCTGAGGCAAGCTTGAACCCAGACCGGGAGCTAAGAAGGTTGAAGCAGATGTTTGAAGCTTGGAAGAAGGATTATGGGTCGAGACTGCGGGAGACCAAGGTGATCCTGCACAAACTTGGAAGCGAGGAAGGGAATTCTGACAAGGCAAGGAAGAAGTGGTGGGGAAGGTTGAACAGCTCGAGGATAAATTAA 3633 0.4349 MASAETHSTGSHPSSEKMPRKPTLNARVPPSLQSIRSLPVDFRFTGSPSSHSTELSDAINTDNNHTNSCSIIPESDDLVGEVFEGLEDTVSNMEPTNDDSPYSKKTISVEERPSEGDEYLDLMTSPLPVLSPSRTEFRWSDTSSFAAKKKLQSWCQLPNGNWALGKIMSTSGNESDISLAEGKVLTVNTECLLPANPDILDGVDDLMQLSYLNEPSVVYNLQYRYNQDMIYTKAGPVLVAINPFKEVPLYRNDYIEAYRRKSMESPHVYAITDTAIREMIRDEVNQSIIISGESGAGKTETAKIAMQYLAALGGGSGIEYEILKTNPILEAFGNAKTSRNDNSSRFGKLIEIHFSEAGKISGAKIQTFLLEKSRVVQCAEGERSYHIFYQLCVGAPPALREKLNLKNANEYKYLKQSNCYSIAGVDDAERFRLVMEALDIVHVSKEDQDSVFAMLAAVLWLGNISFTVIDNENHVEAVSDEGLKNVAKLIGCDVGELKLALSTRKMRVGNDNIVQKLTLSQAIDTRDALAKSLYACLFEWLVEQINKSLEVGKRRTGRSIGILDIYGFESFDRNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFEDNQDCLNLFEKKPLGLLSLLDEESTFPNGTDLTFANKLKQHLNSNSSFRGERGKAFSVCHYAGEVTYDTTGFLEKNRDLLHLDSIQLLSSCTCQLPQIFASNMLAQSEKPVVGPSYRSGGADSQKLSVATKFKGQLFQLMQRLENTTPHFIRCIKPNNLQRPGTYDQQLVLQQLRCCGVLEVVRISRSGYPTRMSHQKFARRYGFLLESVASHDPLSVSVAILHQFNILPEMYQVGYTKLFFRTGQIGVLEDTRNRTLHGILRVQSCFRGHKARSYLKELRRGIATLQSFVRGEKTRKEYAVLVQRHRAAVVIQRQIKGMVARKTFVNVRDASILIQSVIRGWLVRRCSGDVGLLTSTKKLEGAKGSEPDQVLVKASVLAELQRRVLKAEAALREKEEENDILHQRIHQYESRWSEYELKMKSMEEVWQKQMRSLQSSLSVAKKSLAIDDAERKSDASVNVTDDRDYSWDIGSNNYKGRENNGVRPGSRVMDREMSAGLSVISRMAEEFEQRSQVFGDDAKFLVEVKSGQAEASLNPDRELRRLKQMFEAWKKDYGSRLRETKVILHKLGSEEGNSDKARKKWWGRLNSSRIN* 1211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g02186 1210 ProSiteProfiles IQ motif profile. 897 926 IPR000048 GO:0005515
Eupl04g02186 1210 ProSiteProfiles IQ motif profile. 947 975 IPR000048 GO:0005515
Eupl04g02186 1210 PANTHER MYOSIN 194 1196 - -
Eupl04g02186 1210 MobiDBLite consensus disorder prediction 90 111 - -
Eupl04g02186 1210 Gene3D - 807 873 - -
Eupl04g02186 1210 Pfam Myosin head (motor domain) 203 860 IPR001609 GO:0003774|GO:0005524|GO:0016459
Eupl04g02186 1210 MobiDBLite consensus disorder prediction 1 68 - -
Eupl04g02186 1210 Gene3D Kinesin motor domain 200 806 IPR036961 -
Eupl04g02186 1210 MobiDBLite consensus disorder prediction 1 18 - -
Eupl04g02186 1210 Coils Coil 996 1030 - -
Eupl04g02186 1210 Gene3D - 383 439 - -
Eupl04g02186 1210 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 921 964 IPR027417 -
Eupl04g02186 1210 FunFam Unconventional myosin-XIX 571 763 - -
Eupl04g02186 1210 ProSiteProfiles Myosin motor domain profile. 201 872 IPR001609 GO:0003774|GO:0005524|GO:0016459
Eupl04g02186 1210 Gene3D - 571 763 - -
Eupl04g02186 1210 Gene3D Myosin VI head, motor domain, U50 subdomain 440 548 - -
Eupl04g02186 1210 ProSiteProfiles IQ motif profile. 876 903 IPR000048 GO:0005515
Eupl04g02186 1210 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 920 IPR027417 -
Eupl04g02186 1210 CDD MYSc_Myo8 215 860 IPR036022 -
Eupl04g02186 1210 Gene3D - 876 924 - -
Eupl04g02186 1210 Gene3D - 925 966 - -
Eupl04g02186 1210 SMART iq_5 873 895 IPR000048 GO:0005515
Eupl04g02186 1210 SMART iq_5 945 967 IPR000048 GO:0005515
Eupl04g02186 1210 SMART iq_5 896 918 IPR000048 GO:0005515
Eupl04g02186 1210 SMART iq_5 922 944 IPR000048 GO:0005515
Eupl04g02186 1210 Pfam IQ calmodulin-binding motif 878 895 IPR000048 GO:0005515
Eupl04g02186 1210 Pfam IQ calmodulin-binding motif 898 917 IPR000048 GO:0005515
Eupl04g02186 1210 Pfam IQ calmodulin-binding motif 947 964 IPR000048 GO:0005515
Eupl04g02186 1210 Pfam IQ calmodulin-binding motif 924 943 IPR000048 GO:0005515
Eupl04g02186 1210 MobiDBLite consensus disorder prediction 27 68 - -
Eupl04g02186 1210 PRINTS Myosin heavy chain signature 231 250 IPR001609 GO:0003774|GO:0005524|GO:0016459
Eupl04g02186 1210 PRINTS Myosin heavy chain signature 559 587 IPR001609 GO:0003774|GO:0005524|GO:0016459
Eupl04g02186 1210 PRINTS Myosin heavy chain signature 612 640 IPR001609 GO:0003774|GO:0005524|GO:0016459
Eupl04g02186 1210 PRINTS Myosin heavy chain signature 285 310 IPR001609 GO:0003774|GO:0005524|GO:0016459
Eupl04g02186 1210 PRINTS Myosin heavy chain signature 327 354 IPR001609 GO:0003774|GO:0005524|GO:0016459
Eupl04g02186 1210 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 148 197 IPR004009 GO:0003774|GO:0005524|GO:0016459
Eupl04g02186 1210 ProSiteProfiles IQ motif profile. 923 950 IPR000048 GO:0005515
Eupl04g02186 1210 FunFam Myosin heavy chain 383 439 - -
Eupl04g02186 1210 SMART MYSc_2a 195 873 IPR001609 GO:0003774|GO:0005524|GO:0016459
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g02186 Eupl-Chr4 52255177 52280231 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g02186 27 1208 Myosins gene family AT1G50360 74.242 0.0 1788
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g02186 - K10357 nnu:104591935 2050.4