Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl04g02184 ATGAACGAGAAGGCATCCGTTACCAAGGAGATCGACGCCAAGAACACAAAAATATTGGAGAGTCTTCTTAAGCTACCAGAGAATAGGGAGTGTGCAGATTGTAGGAGCAAGGCCCCACGATGGGCAAGTGTGAACCTAGGAATCTTTATTTGCATACAATGTTCAGGAATACATCGGAGTCTGGGAGTTCACATATCGAAGGTACGGTCTGCTACTTTGGATACATGGCTACCTGAACAAGTTTCTTTTATGCAAGCCATGGGTAATGAGAAGTCCAACAGTTATTGGGAATCAGAATTGCCTCCAACATTCGACAGGAGTGGAATTGAAAAATTCATTCGTTCAAAGTATGAGGAGAAAAGATGGGTTCTAAAGAAAGCAGCACAATCAACCCCAAAACTGGAGGAAAAGAGCTCTAGTTTCAACCAGGGACTACAAGGTAGAGACAGTAGTCGTGATTGTAACAACTCAAAGAAACCCTCCCACAATGTAGAGATTCCTATCAAGCACATGCTACAAGTAACTCCACCAACAAGACCGTATCAGGGTTCTTCAGATATGAAGACAAGGGTAATTCTCTCGCCTCCCCCCAAGGGTACACCAAAAATGGCTGAACACAAACATGGACCACATATCCAGAAGGCCGATTTTGCTACTGATCTCTTCAATGGGCTCTCTGTGGAAGGTGCAAAAGAAAACATTTCCATCACATCTCATTTGGGCGACAATTCTTGGGCAACATTTGAATGTACAGGAGTACATTCATCCCAGAAGGCTGAGCCAGAAAAGTTGATCCCAAGTAGTTTGGCATCGGGAGCAGAAGTTGCAGTTGGAGAGTCAACAAATTCGACAGCCCCACCAAATCACAGTGGAGAAATGATGGAGATCGACAATATGAACCTCTTAAAAAAGCATCAATCACTAGTGACTGCTGCAGTGAGTGGAGAGGTATTGTCATTTACAAAAAAGAAACATGAGCTGAATGCTAATGGTTCATCGATTGCTTTTGGGAGGATTACATGCAGTAATAACTTTCAGGATCTTGGAGGGGAGAAACTGATGACCGGTCAGAATGGTTTCAAGACATGTAATCAGAACTAG 1101 0.4332 MNEKASVTKEIDAKNTKILESLLKLPENRECADCRSKAPRWASVNLGIFICIQCSGIHRSLGVHISKVRSATLDTWLPEQVSFMQAMGNEKSNSYWESELPPTFDRSGIEKFIRSKYEEKRWVLKKAAQSTPKLEEKSSSFNQGLQGRDSSRDCNNSKKPSHNVEIPIKHMLQVTPPTRPYQGSSDMKTRVILSPPPKGTPKMAEHKHGPHIQKADFATDLFNGLSVEGAKENISITSHLGDNSWATFECTGVHSSQKAEPEKLIPSSLASGAEVAVGESTNSTAPPNHSGEMMEIDNMNLLKKHQSLVTAAVSGEVLSFTKKKHELNANGSSIAFGRITCSNNFQDLGGEKLMTGQNGFKTCNQN* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl04g02184 366 CDD ArfGap 19 117 - -
Eupl04g02184 366 Pfam Putative GTPase activating protein for Arf 17 125 IPR001164 GO:0005096
Eupl04g02184 366 Gene3D Arf GTPase activating protein 1 131 IPR038508 -
Eupl04g02184 366 ProSiteProfiles ARF GTPase-activating proteins domain profile. 16 130 IPR001164 GO:0005096
Eupl04g02184 366 MobiDBLite consensus disorder prediction 133 151 - -
Eupl04g02184 366 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD5 1 344 IPR044520 GO:0005096
Eupl04g02184 366 SMART arf_gap_3 16 130 IPR001164 GO:0005096
Eupl04g02184 366 PRINTS HIV Rev interacting protein signature 28 47 IPR001164 GO:0005096
Eupl04g02184 366 PRINTS HIV Rev interacting protein signature 68 89 IPR001164 GO:0005096
Eupl04g02184 366 PRINTS HIV Rev interacting protein signature 47 64 IPR001164 GO:0005096
Eupl04g02184 366 FunFam stromal membrane-associated protein 1 isoform X1 1 128 - -
Eupl04g02184 366 MobiDBLite consensus disorder prediction 133 164 - -
Eupl04g02184 366 SUPERFAMILY ArfGap/RecO-like zinc finger 15 125 IPR037278 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl04g02184 Eupl-Chr4 52195864 52218883 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl04g02184 19 302 C2H2 Transcription Factor Family AT4G05330 28.188 2.39e-30 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl04g02184 K12486 - nnu:104613368 300.056